PF00258
Help to interpret the results
Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF00258, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains
within the database. 46 occurences are identified.
The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction.
Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.
Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.
Description
External link |
PF00258 |
Description |
Flavodoxin |
Occurence in the database
PF00258 is associated with 46 different proteins (see tab "Protein list" and "Profile") |
The 46 proteins are classified into 6 different orthogroup(s)
|
# |
Orthogroup |
Locus |
Start |
Stop |
S. |
Gene |
Product |
Organism |
0 |
group_2531 |
FBDBKF_02320 |
152665 |
154179 |
1 |
norV |
anaerobic nitric oxide reductase flavorubredoxin |
Morganella morganii S1 |
1 |
group_83 |
FBDBKF_03155 |
34003 |
35799 |
-1 |
cysJ |
NADPH-dependent assimilatory sulfite reductase flavoprotein subunit |
Morganella morganii S1 |
2 |
group_818 |
FBDBKF_04105 |
6835 |
7353 |
1 |
fldB |
flavodoxin FldB |
Morganella morganii S1 |
3 |
group_1067 |
FBDBKF_06045 |
34903 |
35352 |
-1 |
fldA |
flavodoxin |
Morganella morganii S1 |
4 |
group_1532 |
FBDBKF_09900 |
75384 |
75914 |
1 |
fldA |
flavodoxin FldA |
Morganella morganii S1 |
5 |
group_2062 |
FBDBKF_15445 |
14829 |
15272 |
1 |
mioC |
FMN-binding protein MioC |
Morganella morganii S1 |
6 |
group_83 |
FBDBKF_19010 |
18129 |
19907 |
-1 |
cysJ |
Flavoprotein (flavin reductase) subunit CysJ of sulfite and N-hydroxylaminopurine reductases |
Morganella morganii S1 |
7 |
group_2531 |
EHELCC_02790 |
540485 |
541999 |
1 |
norV |
anaerobic nitric oxide reductase flavorubredoxin |
Morganella morganii S2 |
8 |
group_1532 |
EHELCC_04700 |
267349 |
267879 |
1 |
fldA |
flavodoxin FldA |
Morganella morganii S2 |
9 |
group_818 |
EHELCC_05395 |
66292 |
66810 |
1 |
fldB |
flavodoxin FldB |
Morganella morganii S2 |
10 |
group_83 |
EHELCC_07380 |
211304 |
213100 |
1 |
cysJ |
NADPH-dependent assimilatory sulfite reductase flavoprotein subunit |
Morganella morganii S2 |
11 |
group_1067 |
EHELCC_09090 |
35475 |
35924 |
-1 |
fldA |
flavodoxin |
Morganella morganii S2 |
12 |
group_2062 |
EHELCC_15805 |
14129 |
14572 |
1 |
mioC |
FMN-binding protein MioC |
Morganella morganii S2 |
13 |
group_83 |
EHELCC_18755 |
18129 |
19907 |
-1 |
cysJ |
Flavoprotein (flavin reductase) subunit CysJ of sulfite and N-hydroxylaminopurine reductases |
Morganella morganii S2 |
14 |
group_2531 |
NLDBIP_00670 |
138137 |
139651 |
-1 |
norV |
anaerobic nitric oxide reductase flavorubredoxin |
Morganella morganii S4 |
15 |
group_1532 |
NLDBIP_04700 |
267145 |
267675 |
1 |
fldA |
flavodoxin FldA |
Morganella morganii S4 |
16 |
group_818 |
NLDBIP_05715 |
107357 |
107875 |
1 |
fldB |
flavodoxin FldB |
Morganella morganii S4 |
17 |
group_83 |
NLDBIP_07705 |
211177 |
212973 |
1 |
cysJ |
NADPH-dependent assimilatory sulfite reductase flavoprotein subunit |
Morganella morganii S4 |
18 |
group_1067 |
NLDBIP_09470 |
35475 |
35924 |
-1 |
fldA |
flavodoxin |
Morganella morganii S4 |
19 |
group_2062 |
NLDBIP_16565 |
66091 |
66534 |
-1 |
mioC |
FMN-binding protein MioC |
Morganella morganii S4 |
20 |
group_83 |
NLDBIP_18550 |
5606 |
7384 |
1 |
cysJ |
Flavoprotein (flavin reductase) subunit CysJ of sulfite and N-hydroxylaminopurine reductases |
Morganella morganii S4 |
21 |
group_2531 |
LHKJJB_01365 |
253034 |
254548 |
1 |
norV |
anaerobic nitric oxide reductase flavorubredoxin |
Morganella morganii S3 |
22 |
group_818 |
LHKJJB_02595 |
84881 |
85399 |
1 |
fldB |
flavodoxin FldB |
Morganella morganii S3 |
23 |
group_83 |
LHKJJB_07240 |
174923 |
176719 |
1 |
cysJ |
NADPH-dependent assimilatory sulfite reductase flavoprotein subunit |
Morganella morganii S3 |
24 |
group_1067 |
LHKJJB_08285 |
181314 |
181763 |
1 |
fldA |
flavodoxin |
Morganella morganii S3 |
25 |
group_1532 |
LHKJJB_13930 |
67703 |
68233 |
-1 |
fldA |
flavodoxin FldA |
Morganella morganii S3 |
26 |
group_2062 |
LHKJJB_16240 |
14129 |
14572 |
1 |
mioC |
FMN-binding protein MioC |
Morganella morganii S3 |
27 |
group_83 |
LHKJJB_18625 |
18129 |
19907 |
-1 |
cysJ |
Flavoprotein (flavin reductase) subunit CysJ of sulfite and N-hydroxylaminopurine reductases |
Morganella morganii S3 |
28 |
group_2531 |
HKOGLL_01405 |
258545 |
260059 |
1 |
norV |
anaerobic nitric oxide reductase flavorubredoxin |
Morganella morganii S5 |
29 |
group_83 |
HKOGLL_03690 |
56668 |
58464 |
-1 |
cysJ |
NADPH-dependent assimilatory sulfite reductase flavoprotein subunit |
Morganella morganii S5 |
30 |
group_818 |
HKOGLL_06070 |
6745 |
7263 |
1 |
fldB |
flavodoxin FldB |
Morganella morganii S5 |
31 |
group_1067 |
HKOGLL_07835 |
181314 |
181763 |
1 |
fldA |
flavodoxin |
Morganella morganii S5 |
32 |
group_1532 |
HKOGLL_12605 |
76165 |
76695 |
1 |
fldA |
flavodoxin FldA |
Morganella morganii S5 |
33 |
group_2062 |
HKOGLL_16010 |
14129 |
14572 |
1 |
mioC |
FMN-binding protein MioC |
Morganella morganii S5 |
34 |
group_83 |
HKOGLL_18360 |
18129 |
19907 |
-1 |
cysJ |
Flavoprotein (flavin reductase) subunit CysJ of sulfite and N-hydroxylaminopurine reductases |
Morganella morganii S5 |
35 |
group_1532 |
F4V73_RS00450 |
96703 |
97233 |
-1 |
fldA |
flavodoxin FldA |
Morganella psychrotolerans |
36 |
group_2531 |
F4V73_RS04695 |
991012 |
992544 |
1 |
norV |
anaerobic nitric oxide reductase flavorubredoxin |
Morganella psychrotolerans |
37 |
group_818 |
F4V73_RS08545 |
1764841 |
1765359 |
1 |
fldB |
flavodoxin FldB |
Morganella psychrotolerans |
38 |
group_83 |
F4V73_RS11765 |
501383 |
503188 |
1 |
cysJ |
NADPH-dependent assimilatory sulfite reductase flavoprotein subunit |
Morganella psychrotolerans |
39 |
group_1067 |
F4V73_RS15860 |
178487 |
178936 |
1 |
|
flavodoxin |
Morganella psychrotolerans |
40 |
group_2062 |
F4V73_RS17700 |
181868 |
182311 |
-1 |
mioC |
FMN-binding protein MioC |
Morganella psychrotolerans |
41 |
group_1532 |
PMI_RS02680 |
586429 |
586956 |
-1 |
fldA |
flavodoxin FldA |
Proteus mirabilis HI4320 |
42 |
group_818 |
PMI_RS09925 |
2153477 |
2153995 |
1 |
fldB |
flavodoxin FldB |
Proteus mirabilis HI4320 |
43 |
group_83 |
PMI_RS11085 |
2439718 |
2441532 |
-1 |
cysJ |
NADPH-dependent assimilatory sulfite reductase flavoprotein subunit |
Proteus mirabilis HI4320 |
44 |
group_1067 |
PMI_RS11310 |
2489934 |
2490377 |
-1 |
|
flavodoxin |
Proteus mirabilis HI4320 |
45 |
group_2062 |
PMI_RS15125 |
3357461 |
3357901 |
1 |
mioC |
FMN-binding protein MioC |
Proteus mirabilis HI4320 |