Orthogroup:group_2560


Homologs in group_2560

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_02665 FBDBKF_02665 Morganella morganii S1 rhaT Permease of the drug/metabolite transporter (DMT) superfamily
EHELCC_03135 EHELCC_03135 Morganella morganii S2 rhaT Permease of the drug/metabolite transporter (DMT) superfamily
NLDBIP_00325 NLDBIP_00325 Morganella morganii S4 rhaT Permease of the drug/metabolite transporter (DMT) superfamily
LHKJJB_01710 LHKJJB_01710 Morganella morganii S3 rhaT Permease of the drug/metabolite transporter (DMT) superfamily
HKOGLL_01750 HKOGLL_01750 Morganella morganii S5 rhaT Permease of the drug/metabolite transporter (DMT) superfamily
F4V73_RS05165 F4V73_RS05165 Morganella psychrotolerans - DMT family transporter

Distribution of group_2560 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_2560 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_2560

Orthogroup content: 6 members

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This page summarizes the annotation of all members of the orthologous group group_2560.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 rhaT 5
2 - 1

Product

# Product Occurence
1 Permease of the drug/metabolite transporter (DMT) superfamily 5
2 DMT family transporter 1

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0697 6 GER Carbohydrate transport and metabolism (G)
Amino acid transport and metabolism (E)
General function prediction only (R)		 Permease of the drug/metabolite transporter (DMT) superfamily

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00892 6 EamA-like transporter family

Annotations of the 10 SwissProt hits

Annotation Number of occurrences
Probable amino-acid metabolite efflux pump 2
Probable cystine transporter YijE 2
Uncharacterized inner membrane transporter YedA 3
Uncharacterized transporter AF_0266 1
Uncharacterized transporter AF_0510 1
Uncharacterized transporter YoaV 1

Protein length

Unique protein length 301

Protein length distribution