PF00254


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF00254, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 36 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF00254
Description FKBP-type peptidyl-prolyl cis-trans isomerase

Occurence in the database

PF00254 is associated with 36 different proteins (see tab "Protein list" and "Profile")
The 36 proteins are classified into 6 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_1128 FBDBKF_06440 126516 126947 -1 fkpB FKBP-type peptidyl-prolyl cis-trans isomerase Morganella morganii S1
1 group_1377 FBDBKF_08515 83453 84073 1 fklB FKBP-type peptidyl-prolyl cis-trans isomerase Morganella morganii S1
2 group_1687 FBDBKF_11770 5633 6391 -1 fkpA FKBP-type peptidyl-prolyl cis-trans isomerase Morganella morganii S1
3 group_1689 FBDBKF_11780 6923 7552 -1 slyD peptidylprolyl isomerase Morganella morganii S1
4 group_2110 FBDBKF_15865 23082 24392 1 tig trigger factor Morganella morganii S1
5 group_1128 EHELCC_09485 127088 127519 -1 fkpB FKBP-type peptidyl-prolyl cis-trans isomerase Morganella morganii S2
6 group_1377 EHELCC_13010 79652 80272 -1 fklB FKBP-type peptidyl-prolyl cis-trans isomerase Morganella morganii S2
7 group_1689 EHELCC_14525 127153 127782 1 slyD peptidylprolyl isomerase Morganella morganii S2
8 group_1687 EHELCC_14535 128314 129072 1 fkpA FKBP-type peptidyl-prolyl cis-trans isomerase Morganella morganii S2
9 group_2110 EHELCC_18465 10521 11831 1 tig trigger factor Morganella morganii S2
10 group_1128 NLDBIP_09865 127088 127519 -1 fkpB FKBP-type peptidyl-prolyl cis-trans isomerase Morganella morganii S4
11 group_1377 NLDBIP_13350 79652 80272 -1 fklB FKBP-type peptidyl-prolyl cis-trans isomerase Morganella morganii S4
12 group_1689 NLDBIP_15620 131090 131719 1 slyD peptidylprolyl isomerase Morganella morganii S4
13 group_1687 NLDBIP_15630 132251 133009 1 fkpA FKBP-type peptidyl-prolyl cis-trans isomerase Morganella morganii S4
14 group_2110 NLDBIP_17300 10521 11831 1 tig trigger factor Morganella morganii S4
15 group_1128 LHKJJB_07890 89719 90150 1 fkpB FKBP-type peptidyl-prolyl cis-trans isomerase Morganella morganii S3
16 group_1377 LHKJJB_13205 82171 82791 1 fklB FKBP-type peptidyl-prolyl cis-trans isomerase Morganella morganii S3
17 group_1687 LHKJJB_14980 5633 6391 -1 fkpA FKBP-type peptidyl-prolyl cis-trans isomerase Morganella morganii S3
18 group_1689 LHKJJB_14990 6923 7552 -1 slyD peptidylprolyl isomerase Morganella morganii S3
19 group_2110 LHKJJB_17360 44357 45667 -1 tig trigger factor Morganella morganii S3
20 group_1128 HKOGLL_07440 89719 90150 1 fkpB FKBP-type peptidyl-prolyl cis-trans isomerase Morganella morganii S5
21 group_1377 HKOGLL_11825 79652 80272 -1 fklB FKBP-type peptidyl-prolyl cis-trans isomerase Morganella morganii S5
22 group_2110 HKOGLL_17035 10521 11831 1 tig trigger factor Morganella morganii S5
23 group_1689 HKOGLL_19295 5799 6428 1 slyD peptidylprolyl isomerase Morganella morganii S5
24 group_1687 HKOGLL_19305 6960 7718 1 fkpA FKBP-type peptidyl-prolyl cis-trans isomerase Morganella morganii S5
25 group_1377 F4V73_RS09740 49702 50322 1 peptidylprolyl isomerase Morganella psychrotolerans
26 group_1285 F4V73_RS13235 269758 273600 -1 hypothetical protein Morganella psychrotolerans
27 group_1689 F4V73_RS14875 210660 211346 1 slyD peptidylprolyl isomerase Morganella psychrotolerans
28 group_1687 F4V73_RS14885 211877 212635 1 fkpA FKBP-type peptidyl-prolyl cis-trans isomerase Morganella psychrotolerans
29 group_1128 F4V73_RS15485 86663 87094 1 fkpB FKBP-type peptidyl-prolyl cis-trans isomerase Morganella psychrotolerans
30 group_2110 F4V73_RS16445 107238 108548 -1 tig trigger factor Morganella psychrotolerans
31 group_1128 PMI_RS00085 29232 29702 1 fkpB FKBP-type peptidyl-prolyl cis-trans isomerase Proteus mirabilis HI4320
32 group_2110 PMI_RS00550 141442 142746 1 tig trigger factor Proteus mirabilis HI4320
33 group_1687 PMI_RS13835 3073801 3074550 -1 fkpA FKBP-type peptidyl-prolyl cis-trans isomerase Proteus mirabilis HI4320
34 group_1689 PMI_RS13845 3075177 3075818 -1 slyD peptidylprolyl isomerase Proteus mirabilis HI4320
35 group_1377 PMI_RS16845 3710005 3710625 1 peptidylprolyl isomerase Proteus mirabilis HI4320