Orthogroup:group_1190


Homologs in group_1190

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_06870 FBDBKF_06870 Morganella morganii S1 gndA NADP-dependent phosphogluconate dehydrogenase
EHELCC_04100 EHELCC_04100 Morganella morganii S2 gndA NADP-dependent phosphogluconate dehydrogenase
NLDBIP_04100 NLDBIP_04100 Morganella morganii S4 gndA NADP-dependent phosphogluconate dehydrogenase
LHKJJB_09930 LHKJJB_09930 Morganella morganii S3 gndA NADP-dependent phosphogluconate dehydrogenase
HKOGLL_09045 HKOGLL_09045 Morganella morganii S5 gndA NADP-dependent phosphogluconate dehydrogenase
F4V73_RS01015 F4V73_RS01015 Morganella psychrotolerans gndA NADP-dependent phosphogluconate dehydrogenase
PMI_RS03225 PMI_RS03225 Proteus mirabilis HI4320 gndA NADP-dependent phosphogluconate dehydrogenase

Distribution of group_1190 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_1190 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_1190

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_1190.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 gndA 7

Product

# Product Occurence
1 NADP-dependent phosphogluconate dehydrogenase 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0362 7 G Carbohydrate transport and metabolism (G) 6-phosphogluconate dehydrogenase

Kegg Ortholog Annotation(s)

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00393 7 6-phosphogluconate dehydrogenase, C-terminal domain
PF03446 7 NAD binding domain of 6-phosphogluconate dehydrogenase

Virulence factor Annotation(s)

VF gene ID Occurences Protein VF ID Category
VFG048828 1 NADP-dependent phosphogluconate dehydrogenase VF0560 Immune modulation
VFG048848 1 6-phosphogluconate dehydrogenase VF0560 Immune modulation
VFG048941 5 NADP-dependent phosphogluconate dehydrogenase VF0560 Immune modulation

Annotations of the 83 SwissProt hits

Annotation Number of occurrences
2-(hydroxymethyl)glutarate dehydrogenase 1
2-hydroxy-3-oxopropionate reductase 3
3-hydroxyisobutyrate dehydrogenase, mitochondrial 5
3-sulfolactaldehyde reductase 1
6-phosphogluconate dehydrogenase, NAD(+)-dependent, decarboxylating 3
6-phosphogluconate dehydrogenase, NADP(+)-dependent, decarboxylating 1
6-phosphogluconate dehydrogenase, decarboxylating 42
6-phosphogluconate dehydrogenase, decarboxylating (Fragment) 10
6-phosphogluconate dehydrogenase, decarboxylating 1 3
6-phosphogluconate dehydrogenase, decarboxylating 1, chloroplastic 1
6-phosphogluconate dehydrogenase, decarboxylating 2 2
6-phosphogluconate dehydrogenase, decarboxylating 2, chloroplastic 2
6-phosphogluconate dehydrogenase, decarboxylating 3, chloroplastic 1
Glyoxylate/succinic semialdehyde reductase 1 1
Glyoxylate/succinic semialdehyde reductase 2, chloroplastic 1
Probable 3-hydroxyisobutyrate dehydrogenase, mitochondrial 1
Probable 3-hydroxyisobutyrate dehydrogenase-like 1, mitochondrial 1
Putative 6-phosphogluconate dehydrogenase YqeC 1
Uncharacterized oxidoreductase Sfri_1503 1
Uncharacterized oxidoreductase YkwC 1
Uncharacterized oxidoreductase slr0229 1

Protein length

Min length 468
Max length 470
Mean length (sd) 469.7 (0.8)
Median length 470.0

Protein length distribution