Orthogroup:group_2148


Homologs in group_2148

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_16140 FBDBKF_16140 Morganella morganii S1 selA L-seryl-tRNA(Sec) selenium transferase
EHELCC_16175 EHELCC_16175 Morganella morganii S2 selA L-seryl-tRNA(Sec) selenium transferase
NLDBIP_17165 NLDBIP_17165 Morganella morganii S4 selA L-seryl-tRNA(Sec) selenium transferase
LHKJJB_17085 LHKJJB_17085 Morganella morganii S3 selA L-seryl-tRNA(Sec) selenium transferase
HKOGLL_16755 HKOGLL_16755 Morganella morganii S5 selA L-seryl-tRNA(Sec) selenium transferase
F4V73_RS17475 F4V73_RS17475 Morganella psychrotolerans selA L-seryl-tRNA(Sec) selenium transferase
PMI_RS15375 PMI_RS15375 Proteus mirabilis HI4320 selA L-seryl-tRNA(Sec) selenium transferase

Distribution of group_2148 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_2148 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_2148

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_2148.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 selA 7

Product

# Product Occurence
1 L-seryl-tRNA(Sec) selenium transferase 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG1921 7 J Translation, ribosomal structure and biogenesis (J) Seryl-tRNA(Sec) selenium transferase

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K01042 7 L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1] Selenocompound metabolism
Aminoacyl-tRNA biosynthesis
Metabolic pathways		 -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF03841 7 L-seryl-tRNA selenium transferase
PF12390 7 Selenocysteine synthase N terminal

Annotations of the 131 SwissProt hits

Annotation Number of occurrences
5'-C-glycyluridine monooxygenase-decarboxylase 1
D-glucosaminate-6-phosphate ammonia lyase 1
L-seryl-tRNA(Sec) selenium transferase 127
UPF0425 pyridoxal phosphate-dependent protein MMP0002 1
Uncharacterized protein mlr3804 1

Protein length

Min length 460
Max length 463
Mean length (sd) 460.4 (1.1)
Median length 460.0

Protein length distribution