PF00037


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Pfam domains PF00037, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Pfam domains within the database. 20 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Pfam domain(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domains has been clustered.
In red the Pfam domains with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Pfam domains prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domains.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domains prediction.

Description

External link PF00037
Description 4Fe-4S binding domain

Occurence in the database

PF00037 is associated with 20 different proteins (see tab "Protein list" and "Profile")
The 20 proteins are classified into 4 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_555 FBDBKF_01390 272972 273232 1 yfhL YfhL family 4Fe-4S dicluster ferredoxin Morganella morganii S1
1 group_798 FBDBKF_03745 152857 153477 -1 hycB Fe-S-cluster-containing hydrogenase component 2 Morganella morganii S1
2 group_1601 FBDBKF_10445 44677 45522 -1 iorA TPP-dependent indolepyruvate ferredoxin oxidoreductase, alpha subunit Morganella morganii S1
3 group_555 EHELCC_00155 35636 35896 -1 yfhL YfhL family 4Fe-4S dicluster ferredoxin Morganella morganii S2
4 group_798 EHELCC_06790 93626 94246 1 hycB Fe-S-cluster-containing hydrogenase component 2 Morganella morganii S2
5 group_1601 EHELCC_14780 44667 45512 -1 iorA TPP-dependent indolepyruvate ferredoxin oxidoreductase, alpha subunit Morganella morganii S2
6 group_555 NLDBIP_03305 644240 644500 1 yfhL YfhL family 4Fe-4S dicluster ferredoxin Morganella morganii S4
7 group_798 NLDBIP_07115 93499 94119 1 hycB Fe-S-cluster-containing hydrogenase component 2 Morganella morganii S4
8 group_1601 NLDBIP_14610 44667 45512 -1 iorA TPP-dependent indolepyruvate ferredoxin oxidoreductase, alpha subunit Morganella morganii S4
9 group_555 LHKJJB_04820 251481 251741 1 yfhL YfhL family 4Fe-4S dicluster ferredoxin Morganella morganii S3
10 group_798 LHKJJB_06650 57245 57865 1 hycB Fe-S-cluster-containing hydrogenase component 2 Morganella morganii S3
11 group_1601 LHKJJB_14735 96214 97059 1 iorA TPP-dependent indolepyruvate ferredoxin oxidoreductase, alpha subunit Morganella morganii S3
12 group_555 HKOGLL_02225 35841 36101 -1 yfhL YfhL family 4Fe-4S dicluster ferredoxin Morganella morganii S5
13 group_798 HKOGLL_04280 175522 176142 -1 hycB Fe-S-cluster-containing hydrogenase component 2 Morganella morganii S5
14 group_1601 HKOGLL_13355 96214 97059 1 iorA TPP-dependent indolepyruvate ferredoxin oxidoreductase, alpha subunit Morganella morganii S5
15 group_555 F4V73_RS02005 435329 435589 -1 YfhL family 4Fe-4S dicluster ferredoxin Morganella psychrotolerans
16 group_798 F4V73_RS11125 363961 364578 1 4Fe-4S dicluster domain-containing protein Morganella psychrotolerans
17 group_1601 F4V73_RS14145 42981 43856 -1 4Fe-4S binding protein Morganella psychrotolerans
18 group_798 PMI_RS12500 2772202 2772822 -1 4Fe-4S dicluster domain-containing protein Proteus mirabilis HI4320
19 group_785 PMI_RS17815 3915209 3915766 1 hydN electron transport protein HydN Proteus mirabilis HI4320