Orthogroup:group_628


Homologs in group_628

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_02025 FBDBKF_02025 Morganella morganii S1 cmoB tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB
EHELCC_02495 EHELCC_02495 Morganella morganii S2 cmoB tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB
NLDBIP_00965 NLDBIP_00965 Morganella morganii S4 cmoB tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB
LHKJJB_01070 LHKJJB_01070 Morganella morganii S3 cmoB tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB
HKOGLL_01110 HKOGLL_01110 Morganella morganii S5 cmoB tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB
F4V73_RS04390 F4V73_RS04390 Morganella psychrotolerans cmoB tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB
PMI_RS05375 PMI_RS05375 Proteus mirabilis HI4320 cmoB tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB

Distribution of group_628 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_628 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_628

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_628.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 cmoB 7

Product

# Product Occurence
1 tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG2227 7 H Coenzyme transport and metabolism (H) 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K15257 7 tRNA (mo5U34)-methyltransferase [EC:2.1.1.-] - -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF08003 7 Protein of unknown function (DUF1698)

Annotations of the 212 SwissProt hits

Annotation Number of occurrences
O-methyltransferase cnsE 1
Probable protein arginine N-methyltransferase 6 1
Probable protein arginine N-methyltransferase 6.2 2
Ubiquinone biosynthesis O-methyltransferase 22
Ubiquinone biosynthesis O-methyltransferase, mitochondrial 1
Uncharacterized protein HI_0912 1
tRNA U34 carboxymethyltransferase 184

Protein length

Min length 324
Max length 325
Mean length (sd) 324.1 (0.4)
Median length 324.0

Protein length distribution