PF00015

Help to interpret the results

Three outputs have been generated:
General: this tab contains the description, occurence in the database and other information related to the selected Pfam domain PF00015
Protein list: lists the 64 occurences of the Pfam domain within the database. The table reports information on each occurence.
Profile: phylogenetic tree annotated with
- the presence of the Pfam domain of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Pfam domain has been clustered.
Orthogroups are shown in red if they are annotated with that particular Pfam domain in a given genome , in green otherwise, i.e. if there is a discrepency between orthogroup clustering and Pfam domain prediction.
Green homologs (same orthogroup) are not positive hit(s) for the considered Pfam domain.
Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Pfam domain prediction.

Description

External link PF00015
Description Methyl-accepting chemotaxis protein (MCP) signalling domain

Occurence in the database

PF00015 is associated with 64 different proteins
The 64 proteins are classified into 10 different orthogroup(s)
Orthogroup Locus Start Stop S. Gene Product Organism
0 group_559 FBDBKF_00780 141430 143004 -1 tar Methyl-accepting chemotaxis protein (MCP) Morganella morganii S1
1 group_492 FBDBKF_00785 143117 144802 -1 tar Methyl-accepting chemotaxis protein (MCP) Morganella morganii S1
2 group_2624 FBDBKF_03410 85309 86874 1 tar Methyl-accepting chemotaxis protein (MCP) Morganella morganii S1
3 group_1501 FBDBKF_09190 67786 68847 -1 tar Methyl-accepting chemotaxis protein (MCP) Morganella morganii S1
4 group_2848 FBDBKF_10245 1153 3087 -1 tar Methyl-accepting chemotaxis protein (MCP) Morganella morganii S1
5 group_2960 FBDBKF_15515 29416 30576 1 tar Methyl-accepting chemotaxis protein (MCP) Morganella morganii S1
6 group_358 FBDBKF_15520 30567 32108 -1 pAS PAS domain Morganella morganii S1
7 group_3011 FBDBKF_17640 24270 25847 1 tar Methyl-accepting chemotaxis protein (MCP) Morganella morganii S1
8 group_3047 FBDBKF_18180 1914 3473 1 Methyl-accepting chemotaxis protein I (Serine chemoreceptor protein) Morganella morganii S1
9 group_492 EHELCC_00760 164066 165751 1 tar Methyl-accepting chemotaxis protein (MCP) Morganella morganii S2
10 group_559 EHELCC_00765 165864 167438 1 tar Methyl-accepting chemotaxis protein (MCP) Morganella morganii S2
11 group_2624 EHELCC_07125 160229 161794 -1 tar Methyl-accepting chemotaxis protein (MCP) Morganella morganii S2
12 group_1501 EHELCC_10220 77257 78318 1 tar Methyl-accepting chemotaxis protein (MCP) Morganella morganii S2
13 group_2848 EHELCC_14580 1143 3077 -1 tar Methyl-accepting chemotaxis protein (MCP) Morganella morganii S2
14 group_2960 EHELCC_15875 28716 29876 1 tar Methyl-accepting chemotaxis protein (MCP) Morganella morganii S2
15 group_358 EHELCC_15880 29867 31408 -1 pAS PAS domain Morganella morganii S2
16 group_3011 EHELCC_18125 23646 25223 1 tar Methyl-accepting chemotaxis protein (MCP) Morganella morganii S2
17 group_3047 EHELCC_18215 1787 3346 1 Methyl-accepting chemotaxis protein I (Serine chemoreceptor protein) Morganella morganii S2
18 group_559 NLDBIP_02695 512698 514272 -1 tar Methyl-accepting chemotaxis protein (MCP) Morganella morganii S4
19 group_492 NLDBIP_02700 514385 516070 -1 tar Methyl-accepting chemotaxis protein (MCP) Morganella morganii S4
20 group_2624 NLDBIP_07450 160102 161667 -1 tar Methyl-accepting chemotaxis protein (MCP) Morganella morganii S4
21 group_1501 NLDBIP_10565 55528 56589 1 tar Methyl-accepting chemotaxis protein (MCP) Morganella morganii S4
22 group_2848 NLDBIP_14410 1143 3077 -1 tar Methyl-accepting chemotaxis protein (MCP) Morganella morganii S4
23 group_358 NLDBIP_16490 49255 50796 1 pAS PAS domain Morganella morganii S4
24 group_2960 NLDBIP_16495 50787 51947 -1 tar Methyl-accepting chemotaxis protein (MCP) Morganella morganii S4
25 group_3011 NLDBIP_18025 13514 15091 -1 tar Methyl-accepting chemotaxis protein (MCP) Morganella morganii S4
26 group_3047 NLDBIP_18140 1988 3547 1 Methyl-accepting chemotaxis protein I (Serine chemoreceptor protein) Morganella morganii S4
27 group_559 LHKJJB_04210 119939 121513 -1 tar Methyl-accepting chemotaxis protein (MCP) Morganella morganii S3
28 group_492 LHKJJB_04215 121626 123311 -1 tar Methyl-accepting chemotaxis protein (MCP) Morganella morganii S3
29 group_2624 LHKJJB_06985 123848 125413 -1 tar Methyl-accepting chemotaxis protein (MCP) Morganella morganii S3
30 group_1501 LHKJJB_10790 134939 136000 -1 tar Methyl-accepting chemotaxis protein (MCP) Morganella morganii S3
31 group_2848 LHKJJB_14935 138649 140583 1 tar Methyl-accepting chemotaxis protein (MCP) Morganella morganii S3
32 group_2960 LHKJJB_16310 28716 29876 1 tar Methyl-accepting chemotaxis protein (MCP) Morganella morganii S3
33 group_358 LHKJJB_16315 29867 31408 -1 pAS PAS domain Morganella morganii S3
34 group_3011 LHKJJB_18220 13514 15091 -1 tar Methyl-accepting chemotaxis protein (MCP) Morganella morganii S3
35 group_3047 LHKJJB_18335 1826 3385 1 Methyl-accepting chemotaxis protein I (Serine chemoreceptor protein) Morganella morganii S3
36 group_492 HKOGLL_02830 164271 165956 1 tar Methyl-accepting chemotaxis protein (MCP) Morganella morganii S5
37 group_559 HKOGLL_02835 166069 167643 1 tar Methyl-accepting chemotaxis protein (MCP) Morganella morganii S5
38 group_2624 HKOGLL_03945 107974 109539 1 tar Methyl-accepting chemotaxis protein (MCP) Morganella morganii S5
39 group_2848 HKOGLL_13555 138649 140583 1 tar Methyl-accepting chemotaxis protein (MCP) Morganella morganii S5
40 group_1501 HKOGLL_13850 68240 69301 -1 tar Methyl-accepting chemotaxis protein (MCP) Morganella morganii S5
41 group_2960 HKOGLL_16080 28716 29876 1 tar Methyl-accepting chemotaxis protein (MCP) Morganella morganii S5
42 group_358 HKOGLL_16085 29867 31408 -1 pAS PAS domain Morganella morganii S5
43 group_3011 HKOGLL_17980 23646 25223 1 tar Methyl-accepting chemotaxis protein (MCP) Morganella morganii S5
44 group_3047 HKOGLL_18070 1804 3363 1 Methyl-accepting chemotaxis protein I (Serine chemoreceptor protein) Morganella morganii S5
45 group_3047 F4V73_RS01725 382163 383722 1 methyl-accepting chemotaxis protein Morganella psychrotolerans
46 group_559 F4V73_RS06780 1406352 1407926 -1 methyl-accepting chemotaxis protein Morganella psychrotolerans
47 group_492 F4V73_RS06785 1408042 1409727 -1 methyl-accepting chemotaxis protein Morganella psychrotolerans
48 group_2488 F4V73_RS10015 108871 110526 -1 methyl-accepting chemotaxis protein Morganella psychrotolerans
49 group_1501 F4V73_RS10780 287454 288539 1 methyl-accepting chemotaxis protein Morganella psychrotolerans
50 group_2624 F4V73_RS11490 443332 444897 -1 methyl-accepting chemotaxis protein Morganella psychrotolerans
51 group_2848 F4V73_RS13960 1331 3271 -1 methyl-accepting chemotaxis protein Morganella psychrotolerans
52 group_3011 F4V73_RS15020 242882 244459 1 methyl-accepting chemotaxis protein Morganella psychrotolerans
53 group_358 F4V73_RS17625 164791 166332 1 PAS domain-containing methyl-accepting chemotaxis protein Morganella psychrotolerans
54 group_2960 F4V73_RS17630 166417 167397 -1 methyl-accepting chemotaxis protein Morganella psychrotolerans
55 group_2488 PMI_RS05695 1239665 1241218 1 methyl-accepting chemotaxis protein Proteus mirabilis HI4320
56 group_559 PMI_RS08130 1775601 1777247 -1 methyl-accepting chemotaxis protein Proteus mirabilis HI4320
57 group_492 PMI_RS08135 1777307 1779013 -1 methyl-accepting chemotaxis protein Proteus mirabilis HI4320
58 group_2488 PMI_RS11775 2603326 2604846 -1 methyl-accepting chemotaxis protein Proteus mirabilis HI4320
59 group_2488 PMI_RS11780 2605002 2606570 -1 methyl-accepting chemotaxis protein Proteus mirabilis HI4320
60 group_1501 PMI_RS13160 2921858 2922784 -1 methyl-accepting chemotaxis protein Proteus mirabilis HI4320
61 group_2488 PMI_RS13870 3080908 3082599 1 methyl-accepting chemotaxis protein Proteus mirabilis HI4320
62 group_2488 PMI_RS13875 3083055 3084782 1 methyl-accepting chemotaxis protein Proteus mirabilis HI4320
63 group_358 PMI_RS13895 3086884 3088428 -1 PAS domain-containing methyl-accepting chemotaxis protein Proteus mirabilis HI4320