K11896


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Kegg Orthologs K11896, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Kegg Orthologs within the database. 10 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Kegg Ortholog(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Kegg Orthologs has been clustered.
In red the Kegg Orthologs with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Kegg Orthologs prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Kegg Orthologs.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Kegg Orthologs prediction.

Description

External link K11896
KO K11896
Description type VI secretion system protein ImpG

KO part of 0 pathways

KO part of 0 modules

Occurence in the database

K11896 is associated with 10 different proteins (see tab "Protein list" and "Profile")
The 10 proteins are classified into 2 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_547 PMI_RS03670 825594 827369 -1 tssF type VI secretion system baseplate subunit TssF Proteus mirabilis HI4320
1 group_547 FBDBKF_01305 251577 253358 1 tssF type VI secretion system baseplate subunit TssF Morganella morganii S1
2 group_547 EHELCC_00240 55510 57291 -1 tssF type VI secretion system baseplate subunit TssF Morganella morganii S2
3 group_547 NLDBIP_03220 622845 624626 1 tssF type VI secretion system baseplate subunit TssF Morganella morganii S4
4 group_547 LHKJJB_04735 230086 231867 1 tssF type VI secretion system baseplate subunit TssF Morganella morganii S3
5 group_547 HKOGLL_02310 55715 57496 -1 tssF type VI secretion system baseplate subunit TssF Morganella morganii S5
6 group_3685 F4V73_RS00075 19566 21413 -1 tssF type VI secretion system baseplate subunit TssF Morganella psychrotolerans
7 group_547 F4V73_RS02365 502660 504441 -1 tssF type VI secretion system baseplate subunit TssF Morganella psychrotolerans
8 group_3685 F4V73_RS09395 1980198 1982075 1 tssF type VI secretion system baseplate subunit TssF Morganella psychrotolerans
9 group_3685 F4V73_RS16745 170962 172725 -1 tssF type VI secretion system baseplate subunit TssF Morganella psychrotolerans