Homologs in group_627

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
EHELCC_00175 EHELCC_00175 100.0 Morganella morganii S2 impG Type VI secretion system protein ImpG
NLDBIP_03285 NLDBIP_03285 100.0 Morganella morganii S4 impG Type VI secretion system protein ImpG
LHKJJB_04800 LHKJJB_04800 100.0 Morganella morganii S3 impG Type VI secretion system protein ImpG
HKOGLL_02245 HKOGLL_02245 100.0 Morganella morganii S5 impG Type VI secretion system protein ImpG
F4V73_RS02305 F4V73_RS02305 75.9 Morganella psychrotolerans - type VI secretion system baseplate subunit TssF
PMI_RS03610 PMI_RS03610 48.1 Proteus mirabilis HI4320 - type VI secretion system baseplate subunit TssF

Distribution of the homologs in the orthogroup group_627

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_627

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism

  • Number of RefSeq hits:

General

Source Morganella morganii S1
Locus tag FBDBKF_01370
Feature type CDS
Gene impG
Product Type VI secretion system protein ImpG
Location 269381 - 271114 (strand: 1)
Length 1734 (nucleotides) / 577 (amino acids)
In genomic island -

Contig

Accession contig_1
Length 309072 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_627
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF05947 Type VI secretion system, TssF

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG3519 Intracellular trafficking, secretion, and vesicular transport (U) U Type VI protein secretion system component VasA

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K11896 type VI secretion system protein ImpG - -

Protein Sequence

MSEIKFLQEQHYLQQLSREFIRDYPHLADVLDPHDEQSGSLLEGFAFLSARLQEKVDDAFPEITLPLLQRLQSRAIKGIPATAVVRFDDQEQIDFPLAIPAGTVVKGAAEEIFTTCNPALLQPYTLLRRYVTHHPSKSCLSLEFKYRGNYKEPETAQLSCFLDPAVSSAGILLLWLSQYFDHIELAHGDMLYHGDETRFSFIPQIGKNNSVLEGAEEKPNWPQKLLEGLYIDHVHHFINIDVPAIVPELDWVLSDTFTLNIYFSKQLPLRNDQLTNSFLLNCAAVVNQEEQKEIILDFHENEAVYRLPLDDAHYITELEHIQLAFEPHEEFRGVVADFYPVTHLAPASRLLPQYQDAWFYALSIDKTITGQNHYYIHFYDNHGKALTVPPGPHFRCTYRCIISAPQSRAEDICHLSPLLPDLLEATGITQCTPCYPPITDNHAYWNLLSHYSANSFMLSSVDSVKQLISDYVLYQDTDRQRCKQINQLLSGIHAVDSVLDDRLVRGKPYRCLDLTMTLDPHKYDNTGDAFMFVMHLYHFFPFCLSENMMLKMNVQFTDNDTVWHLAPYLLNGYKSLI

Flanking regions ( +/- flanking 50bp)

TTAATTCTCCGTATAATAAATACTGGTTACCGGCAGCCGCAGAGTCACTCATGAGCGAAATTAAATTTTTACAGGAACAGCATTATTTACAGCAACTCAGCCGCGAGTTTATCCGCGATTACCCGCACCTTGCTGATGTTCTCGACCCTCATGATGAACAGAGCGGCAGCCTGCTGGAAGGATTTGCTTTCCTCAGCGCCCGGTTGCAGGAAAAAGTGGATGATGCATTTCCTGAAATTACCCTGCCGCTGTTACAGCGCCTGCAATCCCGCGCGATAAAAGGTATTCCGGCCACGGCGGTTGTCCGTTTCGATGATCAGGAGCAAATTGATTTCCCGCTGGCTATCCCCGCAGGTACTGTAGTAAAAGGCGCGGCAGAGGAAATCTTCACCACCTGTAATCCGGCGCTGTTACAGCCTTACACGTTATTACGCCGCTATGTGACGCACCACCCGTCAAAAAGCTGCCTGTCGCTGGAATTTAAATACCGCGGCAACTATAAAGAACCGGAAACCGCACAACTCTCCTGTTTTCTTGATCCCGCCGTCTCTTCCGCCGGTATTTTATTATTGTGGCTGAGCCAGTATTTTGATCATATCGAACTGGCTCACGGCGATATGCTGTATCACGGTGATGAAACCCGGTTCAGCTTTATTCCTCAGATAGGAAAAAATAATTCGGTATTAGAAGGCGCAGAGGAAAAACCGAACTGGCCGCAAAAACTGCTGGAAGGGTTATATATCGATCATGTGCACCATTTTATCAATATTGATGTTCCGGCGATTGTTCCGGAACTTGACTGGGTATTATCAGACACCTTCACACTGAATATTTATTTCAGCAAACAGCTGCCGCTGCGTAATGACCAACTGACAAACAGTTTTCTGCTTAATTGTGCCGCCGTGGTGAATCAGGAAGAACAAAAAGAAATCATCCTGGATTTTCATGAAAATGAAGCGGTTTACCGCCTGCCGCTGGATGATGCTCACTACATCACGGAACTGGAACATATTCAGCTGGCTTTTGAGCCTCACGAGGAATTCCGCGGCGTTGTCGCGGATTTCTATCCGGTGACACACCTGGCACCCGCTTCCCGCCTGCTGCCGCAATATCAGGATGCCTGGTTTTACGCGCTCAGCATCGATAAAACCATCACCGGCCAGAATCATTATTATATCCATTTTTATGATAATCACGGTAAAGCACTGACCGTTCCGCCGGGCCCGCATTTCCGCTGTACTTACCGCTGTATTATCAGTGCACCGCAAAGCCGTGCGGAGGATATCTGCCATCTCAGCCCGCTGCTGCCGGATCTGCTGGAAGCCACCGGTATCACACAATGCACGCCGTGCTACCCGCCGATAACGGATAATCACGCTTACTGGAATCTGCTGTCACACTACAGTGCCAACAGCTTTATGCTGTCGTCAGTGGATTCGGTAAAACAGCTGATCAGCGACTATGTGCTGTATCAGGATACAGACCGGCAGCGCTGCAAACAGATAAACCAGCTGCTGAGCGGTATTCACGCGGTTGATTCAGTACTGGATGACCGTCTTGTCCGGGGAAAACCTTACCGCTGTCTGGATCTGACAATGACTCTTGATCCGCATAAATATGACAATACCGGCGATGCCTTTATGTTTGTCATGCACTTATATCATTTCTTCCCGTTCTGCCTGTCAGAAAATATGATGCTGAAAATGAATGTGCAATTTACCGATAATGATACGGTCTGGCATTTAGCACCTTATTTACTGAACGGGTATAAATCACTGATTTAGATATGTGCATCTGAGGGGAGTTGCTGAAATAAACGGGCTGCTATCACAGA