K06179


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Kegg Orthologs K06179, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Kegg Orthologs within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Kegg Ortholog(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Kegg Orthologs has been clustered.
In red the Kegg Orthologs with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Kegg Orthologs prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Kegg Orthologs.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Kegg Orthologs prediction.

Description

External link K06179
KO K06179
Description 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24]

KO part of 0 pathways

KO part of 0 modules

Occurence in the database

K06179 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_1967 PMI_RS04185 945239 946192 1 rluC 23S rRNA pseudouridine(955/2504/2580) synthase RluC Proteus mirabilis HI4320
1 group_1967 FBDBKF_14755 46374 47333 -1 rluC 23S rRNA pseudouridine(955/2504/2580) synthase RluC Morganella morganii S1
2 group_1967 EHELCC_15560 76450 77409 -1 rluC 23S rRNA pseudouridine(955/2504/2580) synthase RluC Morganella morganii S2
3 group_1967 NLDBIP_16090 76450 77409 -1 rluC 23S rRNA pseudouridine(955/2504/2580) synthase RluC Morganella morganii S4
4 group_1967 LHKJJB_15750 39277 40236 1 rluC 23S rRNA pseudouridine(955/2504/2580) synthase RluC Morganella morganii S3
5 group_1967 HKOGLL_14870 38489 39448 1 rluC 23S rRNA pseudouridine(955/2504/2580) synthase RluC Morganella morganii S5
6 group_1967 F4V73_RS07550 1575183 1576142 -1 rluC 23S rRNA pseudouridine(955/2504/2580) synthase RluC Morganella psychrotolerans