Homologs in group_410

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_17715 FBDBKF_17715 31.1 Morganella morganii S1 tonB Periplasmic protein TonB, links inner and outer membranes
EHELCC_09740 EHELCC_09740 31.1 Morganella morganii S2 tonB Periplasmic protein TonB, links inner and outer membranes
NLDBIP_10120 NLDBIP_10120 31.1 Morganella morganii S4 tonB Periplasmic protein TonB, links inner and outer membranes
LHKJJB_07635 LHKJJB_07635 31.1 Morganella morganii S3 tonB Periplasmic protein TonB, links inner and outer membranes
HKOGLL_07185 HKOGLL_07185 31.1 Morganella morganii S5 tonB Periplasmic protein TonB, links inner and outer membranes
F4V73_RS15245 F4V73_RS15245 30.4 Morganella psychrotolerans - TonB family protein
PMI_RS18455 PMI_RS18455 31.5 Proteus mirabilis HI4320 - energy transducer TonB

Distribution of the homologs in the orthogroup group_410

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_410

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
Q05613 4.32e-19 87 43 1 95 3 tonB Protein TonB Pseudomonas putida

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS07545
Feature type CDS
Gene -
Product TonB family protein
Location 1647458 - 1648312 (strand: -1)
Length 855 (nucleotides) / 284 (amino acids)

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_410
Orthogroup size 8
N. genomes 7

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Genomic region

Domains

PF03544 Gram-negative bacterial TonB protein C-terminal

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG0810 Cell wall/membrane/envelope biogenesis (M) M Periplasmic protein TonB, links inner and outer membranes

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K03832 periplasmic protein TonB - -

Protein Sequence

MDNSCSPSLIIDNTHMLISSSVNQMAQLQPCRYSGFILSIVFHFTLVISYFYITQQRPVIIHQPAPAVMLSLSENVQAVNKEKQIVGVDQQMAVASQKKQQQEIAEKQPNLIINENADILLEKPKKVLQNQTSVKVAPSIAPTKPSPIVSENVSSLSAPSTSHSVAKQQANDVSANYDSDANKEADALALWQAKAKGHLNRYKAYPEEAKRKGRTGAPKVRFIVDGQGYVIACELINSSGVRSLDKEAQSVIKRAQPLPKPPEELLFNGQITIEMAIEFSTLTL

Flanking regions ( +/- flanking 50bp)

ATTATGGCAGAAGAAGGTAGCGATATTACCTCTGAACATGCCGATTATTTGTGGATAACTCCTGCAGCCCATCCTTGATTATTGATAATACGCATATGTTGATCTCTTCTTCCGTTAACCAAATGGCGCAATTACAGCCTTGTCGATATTCAGGCTTTATTTTATCAATAGTATTTCATTTTACTTTAGTCATTAGTTATTTTTATATCACGCAACAACGCCCGGTGATAATCCATCAACCTGCACCGGCTGTTATGCTTAGCTTAAGTGAAAACGTCCAAGCGGTGAATAAAGAAAAACAGATTGTCGGTGTTGATCAGCAAATGGCTGTCGCCAGCCAAAAAAAGCAGCAGCAAGAGATTGCGGAGAAACAACCCAATCTTATTATTAATGAAAATGCAGATATTTTGCTTGAAAAGCCGAAAAAAGTGCTACAAAACCAGACTTCAGTTAAGGTTGCCCCTTCAATTGCACCAACCAAACCTTCACCTATTGTCAGTGAAAATGTATCGAGTTTATCCGCGCCCTCAACAAGCCATTCTGTTGCGAAACAACAGGCTAACGATGTTTCTGCAAATTATGATAGTGATGCAAATAAAGAAGCAGATGCCTTGGCATTATGGCAAGCTAAGGCCAAAGGTCATTTAAATCGTTATAAAGCTTATCCTGAAGAAGCGAAAAGAAAAGGGCGTACGGGAGCACCTAAAGTGCGTTTTATTGTTGATGGACAAGGTTATGTCATAGCCTGCGAATTGATTAATAGCAGTGGTGTGCGCTCACTAGATAAAGAGGCACAAAGTGTTATTAAGCGTGCTCAGCCATTACCAAAGCCCCCAGAAGAACTGCTTTTTAATGGTCAAATAACAATTGAAATGGCAATTGAATTTTCCACATTGACTTTATAATCCTAACATAACAAGGAATTAAACATGTTATCCGCGACAAGAAAAACGGT