K03566


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Kegg Orthologs K03566, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Kegg Orthologs within the database. 21 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Kegg Ortholog(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Kegg Orthologs has been clustered.
In red the Kegg Orthologs with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Kegg Orthologs prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Kegg Orthologs.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Kegg Orthologs prediction.

Description

External link K03566
KO K03566
Description LysR family transcriptional regulator, glycine cleavage system transcriptional activator

KO part of 1 pathways

Biofilm formation - Escherichia coli

KO part of 0 modules

Occurence in the database

K03566 is associated with 21 different proteins (see tab "Protein list" and "Profile")
The 21 proteins are classified into 4 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_1075 PMI_RS11365 2500767 2501687 -1 transcriptional regulator GcvA Proteus mirabilis HI4320
1 group_1075 FBDBKF_06095 43057 43983 -1 lysR DNA-binding transcriptional regulator, LysR family Morganella morganii S1
2 group_1075 EHELCC_09140 43629 44555 -1 lysR DNA-binding transcriptional regulator, LysR family Morganella morganii S2
3 group_1075 NLDBIP_09520 43629 44555 -1 lysR DNA-binding transcriptional regulator, LysR family Morganella morganii S4
4 group_1075 LHKJJB_08235 172683 173609 1 lysR DNA-binding transcriptional regulator, LysR family Morganella morganii S3
5 group_1075 HKOGLL_07785 172683 173609 1 lysR DNA-binding transcriptional regulator, LysR family Morganella morganii S5
6 group_3072 FBDBKF_18810 9102 10013 -1 lysR DNA-binding transcriptional regulator, LysR family Morganella morganii S1
7 group_3072 EHELCC_17005 9103 10014 -1 lysR DNA-binding transcriptional regulator, LysR family Morganella morganii S2
8 group_3072 NLDBIP_18385 9102 10013 -1 lysR DNA-binding transcriptional regulator, LysR family Morganella morganii S4
9 group_3072 LHKJJB_09240 182316 183227 1 lysR DNA-binding transcriptional regulator, LysR family Morganella morganii S3
10 group_3072 HKOGLL_08790 182316 183227 1 lysR DNA-binding transcriptional regulator, LysR family Morganella morganii S5
11 group_3050 FBDBKF_18220 10240 11142 -1 lysR DNA-binding transcriptional regulator, LysR family Morganella morganii S1
12 group_3050 EHELCC_18255 10113 11015 -1 lysR DNA-binding transcriptional regulator, LysR family Morganella morganii S2
13 group_3050 NLDBIP_18180 10314 11216 -1 lysR DNA-binding transcriptional regulator, LysR family Morganella morganii S4
14 group_3050 LHKJJB_18375 10152 11054 -1 lysR DNA-binding transcriptional regulator, LysR family Morganella morganii S3
15 group_3050 HKOGLL_18110 10130 11032 -1 lysR DNA-binding transcriptional regulator, LysR family Morganella morganii S5
16 group_3050 F4V73_RS01750 388201 389088 -1 LysR substrate-binding domain-containing protein Morganella psychrotolerans
17 group_30 F4V73_RS06440 1343655 1344536 -1 LysR substrate-binding domain-containing protein Morganella psychrotolerans
18 group_1075 F4V73_RS15815 170566 171492 1 transcriptional regulator GcvA Morganella psychrotolerans
19 group_30 F4V73_RS13375 305701 306606 -1 LysR family transcriptional regulator Morganella psychrotolerans
20 group_3072 F4V73_RS13785 389921 390829 1 LysR substrate-binding domain-containing protein Morganella psychrotolerans