Homologs in group_3050

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5 homologs were identified in 5 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_18220 FBDBKF_18220 78.6 Morganella morganii S1 lysR DNA-binding transcriptional regulator, LysR family
EHELCC_18255 EHELCC_18255 78.6 Morganella morganii S2 lysR DNA-binding transcriptional regulator, LysR family
NLDBIP_18180 NLDBIP_18180 78.6 Morganella morganii S4 lysR DNA-binding transcriptional regulator, LysR family
LHKJJB_18375 LHKJJB_18375 78.6 Morganella morganii S3 lysR DNA-binding transcriptional regulator, LysR family
HKOGLL_18110 HKOGLL_18110 78.6 Morganella morganii S5 lysR DNA-binding transcriptional regulator, LysR family

Distribution of the homologs in the orthogroup group_3050

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_3050

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P0A9F6 1.32e-35 133 34 8 290 1 gcvA Glycine cleavage system transcriptional activator Escherichia coli (strain K12)
P0A9F7 1.32e-35 133 34 8 290 3 gcvA Glycine cleavage system transcriptional activator Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P0A9F8 1.32e-35 133 34 8 290 3 gcvA Glycine cleavage system transcriptional activator Escherichia coli O157:H7
P45099 2.62e-33 127 29 4 292 3 gcvA Glycine cleavage system transcriptional activator homolog Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
P52676 6.39e-30 117 29 4 290 3 nmcR Carbapenem-hydrolyzing beta-lactamase transcriptional activator Enterobacter cloacae
Q57083 1.24e-29 117 31 3 252 1 perR HTH-type transcriptional regulator PerR Escherichia coli (strain K12)
P46068 2.15e-29 116 30 4 273 2 dsdC HTH-type transcriptional regulator DsdC Escherichia coli (strain K12)
P24734 2.95e-29 115 31 6 287 1 ampR HTH-type transcriptional activator AmpR Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
P52660 3.13e-27 110 30 7 265 3 blaA HTH-type transcriptional regulator BlaA Proteus vulgaris
P55576 9.58e-27 109 30 6 286 3 NGR_a02420 Uncharacterized HTH-type transcriptional regulator y4mQ Sinorhizobium fredii (strain NBRC 101917 / NGR234)
P52658 4.24e-26 107 29 10 297 3 ampR HTH-type transcriptional activator AmpR Citrobacter koseri
P14145 4.39e-26 107 31 8 289 3 ampR HTH-type transcriptional activator AmpR Rhodobacter capsulatus
P05051 4.85e-26 107 31 8 293 3 ampR HTH-type transcriptional activator AmpR Enterobacter cloacae
P34818 8.88e-26 106 33 7 254 3 trpI HTH-type transcriptional regulator TrpI Pseudomonas syringae pv. syringae
P52683 3.83e-24 102 31 2 203 3 smeR Carbapenem-hydrolyzing beta-lactamase transcriptional activator Serratia marcescens
P11720 3e-23 99 33 10 259 1 trpI HTH-type transcriptional regulator TrpI Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
P12529 1.45e-22 97 28 8 297 1 ampR HTH-type transcriptional activator AmpR Citrobacter freundii
P42507 8.2e-21 93 26 10 297 3 hvrB AhcY transcriptional activator HvrB Rhodobacter capsulatus (strain ATCC BAA-309 / NBRC 16581 / SB1003)
P45461 2.81e-20 91 27 8 295 3 ampR HTH-type transcriptional activator AmpR Yersinia enterocolitica
O69772 4.65e-19 88 31 8 279 3 ampR HTH-type transcriptional activator AmpR Providencia stuartii
P30864 6.25e-16 79 26 5 262 3 yafC Uncharacterized HTH-type transcriptional regulator YafC Escherichia coli (strain K12)
P37641 2.59e-15 77 30 5 193 3 yhjC Uncharacterized HTH-type transcriptional regulator YhjC Escherichia coli (strain K12)
Q9JXW7 4.95e-14 74 27 8 266 1 crgA HTH-type transcriptional regulator CrgA Neisseria meningitidis serogroup B (strain ATCC BAA-335 / MC58)
Q9JPU9 1.33e-13 73 27 9 268 1 crgA HTH-type transcriptional regulator CrgA Neisseria meningitidis serogroup C (strain 8013)
A0A0H2ZDG9 1.53e-13 73 25 6 261 3 PA14_22550 HTH-type transcriptional repressor PA14_22550 Pseudomonas aeruginosa (strain UCBPP-PA14)
P76250 3.81e-13 72 29 5 194 1 dmlR HTH-type transcriptional regulator DmlR Escherichia coli (strain K12)
P25544 4.29e-13 71 30 5 172 3 rbcR RuBisCO operon transcriptional regulator Allochromatium vinosum
P52689 1.27e-12 70 29 5 209 3 ltrA Probable HTH-type transcriptional regulator LtrA Klebsiella pneumoniae
P39592 1.51e-12 70 29 1 128 3 ywbI Uncharacterized HTH-type transcriptional regulator YwbI Bacillus subtilis (strain 168)
Q8X4M5 2.18e-12 69 35 1 117 3 cynR HTH-type transcriptional regulator CynR Escherichia coli O157:H7
Q5N5I5 2.66e-12 69 34 4 137 3 cmpR HTH-type transcriptional activator CmpR Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1)
Q9F1R2 2.66e-12 69 34 4 137 1 cmpR HTH-type transcriptional activator CmpR Synechococcus elongatus (strain ATCC 33912 / PCC 7942 / FACHB-805)
Q1R6S1 2.99e-12 69 29 1 147 3 ttdR HTH-type transcriptional activator TtdR Escherichia coli (strain UTI89 / UPEC)
Q8FDH0 2.99e-12 69 29 1 147 3 ttdR HTH-type transcriptional activator TtdR Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
Q0TD46 3.02e-12 69 29 1 147 3 ttdR HTH-type transcriptional activator TtdR Escherichia coli O6:K15:H31 (strain 536 / UPEC)
P45463 3.11e-12 69 29 1 147 3 ttdR HTH-type transcriptional activator TtdR Escherichia coli (strain K12)
P77333 5.55e-12 68 25 8 282 1 pgrR HTH-type transcriptional regulator PgrR Escherichia coli (strain K12)
P27111 1.12e-11 67 35 1 117 1 cynR HTH-type transcriptional regulator CynR Escherichia coli (strain K12)
Q8XBK9 1.75e-11 67 28 1 147 3 ttdR HTH-type transcriptional activator TtdR Escherichia coli O157:H7
P42722 3.29e-11 66 32 3 142 3 cfxR HTH-type transcriptional regulator CfxR Cupriavidus necator (strain ATCC 17699 / DSM 428 / KCTC 22496 / NCIMB 10442 / H16 / Stanier 337)
Q47005 8.34e-11 65 35 4 146 3 nac Nitrogen assimilation regulatory protein nac Escherichia coli (strain K12)
P67662 8.73e-11 65 24 3 194 3 aaeR HTH-type transcriptional activator AaeR Escherichia coli (strain K12)
P67663 8.73e-11 65 24 3 194 3 aaeR HTH-type transcriptional activator AaeR Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P67664 8.73e-11 65 24 3 194 3 aaeR HTH-type transcriptional activator AaeR Escherichia coli O157:H7
P75836 2.89e-10 63 27 4 186 3 ycaN Uncharacterized HTH-type transcriptional regulator YcaN Escherichia coli (strain K12)
P0A9G1 5.19e-10 62 26 6 250 3 metR HTH-type transcriptional regulator MetR Shigella flexneri
P0A9F9 5.19e-10 62 26 6 250 1 metR HTH-type transcriptional regulator MetR Escherichia coli (strain K12)
P0A9G0 5.19e-10 62 26 6 250 3 metR HTH-type transcriptional regulator MetR Escherichia coli O157:H7
P77700 6.3e-10 62 44 0 70 1 yahB Uncharacterized HTH-type transcriptional regulator YahB Escherichia coli (strain K12)
P94387 7.53e-10 62 35 4 136 3 ycgK Uncharacterized HTH-type transcriptional regulator YcgK Bacillus subtilis (strain 168)
P0A2Q4 2.22e-09 60 26 7 249 3 metR HTH-type transcriptional regulator MetR Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
P0A2Q5 2.22e-09 60 26 7 249 3 metR HTH-type transcriptional regulator MetR Salmonella typhi
P20668 6.19e-09 59 32 3 126 1 gltC Transcriptional dual regulator GltC Bacillus subtilis (strain 168)
Q08597 1.08e-08 58 32 3 140 3 nac Nitrogen assimilation regulatory protein nac Klebsiella aerogenes
P77744 1.79e-08 58 26 4 171 3 abgR HTH-type transcriptional regulator AbgR Escherichia coli (strain K12)
Q6B936 3.61e-08 57 32 4 138 3 rbcR Probable RuBisCO transcriptional regulator Gracilaria tenuistipitata var. liui
Q55459 4.78e-08 57 32 4 137 1 cmpR HTH-type transcriptional activator CmpR Synechocystis sp. (strain ATCC 27184 / PCC 6803 / Kazusa)
P96194 7.43e-08 53 38 2 95 3 None Uncharacterized HTH-type transcriptional regulator in ibpB-leuC intergenic region Azotobacter vinelandii
P9WMF5 7.54e-08 56 39 3 103 1 lysG HTH-type transcriptional regulator LysG Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
P9WMF4 7.54e-08 56 39 3 103 3 lysG HTH-type transcriptional regulator LysG Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh)
P67666 7.54e-08 56 39 3 103 3 lysG HTH-type transcriptional regulator LysG Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97)
P52696 1.03e-07 55 26 5 174 3 ybhD Uncharacterized HTH-type transcriptional regulator YbhD Escherichia coli (strain K12)
Q4G384 1.58e-07 55 30 5 133 3 rbcR Probable RuBisCO transcriptional regulator Emiliania huxleyi
Q9X725 2.12e-07 55 28 4 176 3 oxyR Hydrogen peroxide-inducible genes activator Dickeya chrysanthemi
P52595 2.7e-07 54 33 4 136 3 cbbR HTH-type transcriptional regulator CbbR Rhodospirillum rubrum
P43011 2.72e-07 54 26 1 141 3 HI_1364 Uncharacterized HTH-type transcriptional regulator HI_1364 Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
Q85G62 3.23e-07 54 31 3 143 3 rbcR Probable RuBisCO transcriptional regulator Cyanidioschyzon merolae (strain NIES-3377 / 10D)
P48271 4.46e-07 53 32 5 144 3 rbcR Probable RuBisCO transcriptional regulator Cyanophora paradoxa
P52665 4.69e-07 51 33 2 113 3 budR HTH-type transcriptional regulator BudR (Fragment) Klebsiella aerogenes
O35038 6e-07 53 25 3 143 3 ytlI HTH-type transcriptional regulator YtlI Bacillus subtilis (strain 168)
A2CI69 6.12e-07 53 28 4 150 3 rbcR Probable RuBisCO transcriptional regulator Chlorokybus atmophyticus
P0ACR2 6.75e-07 53 31 1 118 3 ydhB Uncharacterized HTH-type transcriptional regulator YdhB Escherichia coli (strain K12)
P0ACR3 6.75e-07 53 31 1 118 3 ydhB Uncharacterized HTH-type transcriptional regulator YdhB Escherichia coli O157:H7
A0T0V5 7.94e-07 53 27 4 144 3 rbcR-A Probable RuBisCO transcriptional regulator Thalassiosira pseudonana
P71318 1.03e-06 52 26 2 156 3 oxyR Hydrogen peroxide-inducible genes activator Pectobacterium carotovorum subsp. carotovorum
Q8KA72 1.13e-06 52 24 9 240 3 metR HTH-type transcriptional regulator MetR Buchnera aphidicola subsp. Schizaphis graminum (strain Sg)
P55181 1.16e-06 52 27 5 147 3 yxjO Uncharacterized HTH-type transcriptional regulator YxjO Bacillus subtilis (strain 168)
P96725 1.69e-06 52 30 2 120 3 ywqM Uncharacterized HTH-type transcriptional regulator YwqM Bacillus subtilis (strain 168)
P72131 2.28e-06 52 26 9 277 1 ptxR HTH-type transcriptional regulator PtxR Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
P52669 2.49e-06 51 28 1 118 3 ttuA HTH-type transcriptional regulator TtuA Agrobacterium vitis
A0T0G2 3.46e-06 51 26 4 144 3 rbcR Probable RuBisCO transcriptional regulator Phaeodactylum tricornutum (strain CCAP 1055/1)
O34685 3.97e-06 50 28 1 119 1 yofA HTH-type transcriptional regulator YofA Bacillus subtilis (strain 168)
P94501 4.44e-06 50 32 3 123 1 gltR HTH-type transcriptional regulator GltR Bacillus subtilis (strain 168)
P45349 4.63e-06 50 29 2 111 3 metR HTH-type transcriptional regulator MetR Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
P51205 4.72e-06 50 31 4 138 3 rbcR Probable RuBisCO transcriptional regulator Porphyra purpurea
Q1XDT2 5.71e-06 50 31 4 138 3 rbcR Probable RuBisCO transcriptional regulator Neopyropia yezoensis
Q47141 9.07e-06 50 35 1 91 1 hcaR Hca operon transcriptional activator HcaR Escherichia coli (strain K12)
Q9HWH8 9.19e-06 49 24 6 213 3 nmoR HTH-type transcriptional regulator NmoR Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
P0ACR0 9.74e-06 50 35 1 92 1 allS HTH-type transcriptional activator AllS Escherichia coli (strain K12)
P0ACR1 9.74e-06 50 35 1 92 3 allS HTH-type transcriptional activator AllS Escherichia coli O157:H7
Q04778 1.04e-05 49 28 2 128 3 alsR HTH-type transcriptional regulator AlsR Bacillus subtilis (strain 168)
P0A4T7 1.07e-05 49 26 2 152 3 pcaQ HTH-type transcriptional regulator PcaQ Rhizobium radiobacter
P0A4T6 1.07e-05 49 26 2 152 3 pcaQ HTH-type transcriptional regulator PcaQ Agrobacterium fabrum (strain C58 / ATCC 33970)
O32255 1.09e-05 49 32 5 125 3 yvbU Uncharacterized HTH-type transcriptional regulator YvbU Bacillus subtilis (strain 168)
Q8FK66 1.1e-05 49 35 1 92 3 allS HTH-type transcriptional activator AllS Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
Q0TKD7 1.1e-05 49 35 1 92 3 allS HTH-type transcriptional activator AllS Escherichia coli O6:K15:H31 (strain 536 / UPEC)
Q1RF30 1.56e-05 49 35 1 92 3 allS HTH-type transcriptional activator AllS Escherichia coli (strain UTI89 / UPEC)
A1A8H0 1.56e-05 49 35 1 92 3 allS HTH-type transcriptional activator AllS Escherichia coli O1:K1 / APEC
P52675 1.6e-05 47 30 2 110 3 cysB HTH-type transcriptional regulator CysB (Fragment) Thiocapsa roseopersicina
P0C6D1 1.67e-05 49 26 1 122 3 irgB Iron-regulated virulence regulatory protein IrgB Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961)
A5F9F9 1.67e-05 49 26 1 122 3 irgB Iron-regulated virulence regulatory protein IrgB Vibrio cholerae serotype O1 (strain ATCC 39541 / Classical Ogawa 395 / O395)
P0A2Q2 1.68e-05 49 45 0 46 3 ilvY HTH-type transcriptional activator IlvY Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
P0A2Q3 1.68e-05 49 45 0 46 3 ilvY HTH-type transcriptional activator IlvY Salmonella typhi
O34827 1.78e-05 48 25 3 143 3 ykuM Uncharacterized HTH-type transcriptional regulator YkuM Bacillus subtilis (strain 168)
P52693 1.85e-05 48 26 5 144 3 ntcB Probable nitrogen assimilation transcriptional activator Synechococcus elongatus (strain ATCC 33912 / PCC 7942 / FACHB-805)
P05827 1.94e-05 48 45 0 46 3 ilvY HTH-type transcriptional regulator IlvY Escherichia coli (strain K12)
A7Z5E4 2.31e-05 48 43 0 57 3 yofA HTH-type transcriptional regulator YofA Bacillus velezensis (strain DSM 23117 / BGSC 10A6 / LMG 26770 / FZB42)
P39376 2.42e-05 48 29 1 109 1 yjiE HTH-type transcriptional regulator YjiE Escherichia coli (strain K12)
P20667 2.97e-05 48 28 5 159 3 catR HTH-type transcriptional regulator CatR Pseudomonas putida
P0ACQ4 3.06e-05 48 27 2 128 1 oxyR DNA-binding transcriptional dual regulator OxyR Escherichia coli (strain K12)
P0ACQ5 3.06e-05 48 27 2 128 3 oxyR Hydrogen peroxide-inducible genes activator Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P0ACQ6 3.06e-05 48 27 2 128 3 oxyR Hydrogen peroxide-inducible genes activator Escherichia coli O157:H7
O33812 3.4e-05 48 26 3 134 3 None Uncharacterized HTH-type transcriptional regulator in lacR 5'region (Fragment) Staphylococcus xylosus
P44821 4.74e-05 47 39 0 51 3 ilvY HTH-type transcriptional activator IlvY Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
O78432 4.81e-05 47 31 5 131 3 rbcR Probable RuBisCO transcriptional regulator Guillardia theta
P67660 5.07e-05 47 34 1 93 1 yhaJ Probable HTH-type transcriptional regulator YhaJ Escherichia coli (strain K12)
P67661 5.07e-05 47 34 1 93 1 yhaJ HTH-type transcriptional regulator YhaJ Escherichia coli O157:H7
P25545 5.09e-05 47 28 8 192 3 cbbR HTH-type transcriptional regulator CbbR Xanthobacter flavus
P07774 5.2e-05 47 42 0 64 1 catM HTH-type transcriptional regulator CatM Acinetobacter baylyi (strain ATCC 33305 / BD413 / ADP1)
Q8YQ82 5.33e-05 47 30 3 130 3 rbcR Probable RuBisCO transcriptional regulator Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576)
P33634 5.45e-05 47 26 5 151 3 yfiE Uncharacterized HTH-type transcriptional regulator YfiE Escherichia coli (strain K12)
Q3MCB5 5.68e-05 47 30 3 130 3 rbcR Probable RuBisCO transcriptional regulator Trichormus variabilis (strain ATCC 29413 / PCC 7937)
Q1R4H3 6.42e-05 47 34 2 98 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli (strain UTI89 / UPEC)
P59369 6.42e-05 47 34 2 98 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
Q0TAV4 6.42e-05 47 34 2 98 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli O6:K15:H31 (strain 536 / UPEC)
B7N260 6.42e-05 47 34 2 98 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli O81 (strain ED1a)
B7MGH6 6.42e-05 47 34 2 98 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli O45:K1 (strain S88 / ExPEC)
B2TU26 6.47e-05 47 34 2 98 3 hdfR HTH-type transcriptional regulator HdfR Shigella boydii serotype 18 (strain CDC 3083-94 / BS512)
B7LUJ5 6.65e-05 47 34 2 98 3 hdfR HTH-type transcriptional regulator HdfR Escherichia fergusonii (strain ATCC 35469 / DSM 13698 / CCUG 18766 / IAM 14443 / JCM 21226 / LMG 7866 / NBRC 102419 / NCTC 12128 / CDC 0568-73)
B7NF72 6.71e-05 47 34 2 98 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC)
Q329U3 6.78e-05 47 34 2 98 3 hdfR HTH-type transcriptional regulator HdfR Shigella dysenteriae serotype 1 (strain Sd197)
B6I4A0 6.78e-05 47 34 2 98 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli (strain SE11)
B7M5B2 6.78e-05 47 34 2 98 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli O8 (strain IAI1)
B5YY14 6.78e-05 47 34 2 98 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli O157:H7 (strain EC4115 / EHEC)
Q8XAW1 6.78e-05 47 34 2 98 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli O157:H7
B7L8A6 6.78e-05 47 34 2 98 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli (strain 55989 / EAEC)
A7ZTW7 6.78e-05 47 34 2 98 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli O139:H28 (strain E24377A / ETEC)
B4E8V9 6.86e-05 47 27 11 232 1 cysB HTH-type transcriptional regulator CysB Burkholderia cenocepacia (strain ATCC BAA-245 / DSM 16553 / LMG 16656 / NCTC 13227 / J2315 / CF5610)
Q3YVK2 6.96e-05 47 34 2 98 3 hdfR HTH-type transcriptional regulator HdfR Shigella sonnei (strain Ss046)
P0A8S0 6.96e-05 47 34 2 98 3 hdfR HTH-type transcriptional regulator HdfR Shigella flexneri
Q0SYV7 6.96e-05 47 34 2 98 3 hdfR HTH-type transcriptional regulator HdfR Shigella flexneri serotype 5b (strain 8401)
Q31UM0 6.96e-05 47 34 2 98 3 hdfR HTH-type transcriptional regulator HdfR Shigella boydii serotype 4 (strain Sb227)
B1LLU0 6.96e-05 47 34 2 98 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli (strain SMS-3-5 / SECEC)
P0A8R9 6.96e-05 47 34 2 98 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli (strain K12)
B1IWY2 6.96e-05 47 34 2 98 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli (strain ATCC 8739 / DSM 1576 / NBRC 3972 / NCIMB 8545 / WDCM 00012 / Crooks)
A8A6M0 6.96e-05 47 34 2 98 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli O9:H4 (strain HS)
B1X9Y2 6.96e-05 47 34 2 98 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli (strain K12 / DH10B)
C4ZZ35 6.96e-05 47 34 2 98 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli (strain K12 / MC4100 / BW2952)
B7UMM1 6.96e-05 47 34 2 98 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli O127:H6 (strain E2348/69 / EPEC)
B7NU32 7.03e-05 47 34 2 98 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli O7:K1 (strain IAI39 / ExPEC)
Q6HPH4 8.43e-05 47 25 0 121 3 czcR HTH-type transcriptional regulator CzcR Bacillus thuringiensis subsp. konkukian (strain 97-27)
Q63H01 0.000104 46 25 0 121 3 czcR HTH-type transcriptional regulator CzcR Bacillus cereus (strain ZK / E33L)
Q81IX0 0.000104 46 25 0 121 3 czcR HTH-type transcriptional regulator CzcR Bacillus cereus (strain ATCC 14579 / DSM 31 / CCUG 7414 / JCM 2152 / NBRC 15305 / NCIMB 9373 / NCTC 2599 / NRRL B-3711)
Q73EY2 0.000104 46 25 0 121 3 czcR HTH-type transcriptional regulator CzcR Bacillus cereus (strain ATCC 10987 / NRS 248)
Q81VJ1 0.000104 46 25 0 121 3 czcR HTH-type transcriptional regulator CzcR Bacillus anthracis
P06614 0.000105 47 25 3 127 1 cysB HTH-type transcriptional regulator CysB Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
P37499 0.000107 46 24 7 188 3 yybE Uncharacterized HTH-type transcriptional regulator YybE Bacillus subtilis (strain 168)
P0A9F3 0.000124 46 25 3 127 3 cysB HTH-type transcriptional regulator CysB Escherichia coli (strain K12)
P0A9F4 0.000124 46 25 3 127 3 cysB HTH-type transcriptional regulator CysB Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P0A9F5 0.000124 46 25 3 127 3 cysB HTH-type transcriptional regulator CysB Escherichia coli O157:H7
A0R8S0 0.000136 46 25 0 121 3 czcR HTH-type transcriptional regulator CzcR Bacillus thuringiensis (strain Al Hakam)
Q01610 0.000144 46 34 0 75 3 PA2220 Putative transcriptional regulator Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
O33945 0.000165 46 24 2 143 3 None Probable cat1 operon transcriptional activator Acinetobacter lwoffii
P45600 0.000167 46 25 3 127 1 cysB HTH-type transcriptional regulator CysB Klebsiella pneumoniae
P70773 0.000176 45 31 4 117 3 argP HTH-type transcriptional regulator ArgP Aeromonas salmonicida
P0A9G3 0.000184 45 45 0 51 3 nhaR Transcriptional activator protein NhaR Shigella flexneri
P0A9G2 0.000184 45 45 0 51 1 nhaR Transcriptional activator protein NhaR Escherichia coli (strain K12)
Q00678 0.000222 45 22 2 144 3 nocR Regulatory protein NocR Agrobacterium fabrum (strain C58 / ATCC 33970)
Q57S50 0.000223 45 41 0 58 3 allS HTH-type transcriptional activator AllS Salmonella choleraesuis (strain SC-B67)
Q9S4Y7 0.000234 45 41 0 58 3 allS HTH-type transcriptional activator AllS Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
Q5PCH2 0.000234 45 41 0 58 3 allS HTH-type transcriptional activator AllS Salmonella paratyphi A (strain ATCC 9150 / SARB42)
A1JI47 0.00028 45 30 3 120 3 hdfR HTH-type transcriptional regulator HdfR Yersinia enterocolitica serotype O:8 / biotype 1B (strain NCTC 13174 / 8081)
B4TNR5 0.000371 45 32 2 98 3 hdfR HTH-type transcriptional regulator HdfR Salmonella schwarzengrund (strain CVM19633)
B5FN59 0.000374 45 32 2 98 3 hdfR HTH-type transcriptional regulator HdfR Salmonella dublin (strain CT_02021853)
P52686 0.000379 45 27 1 122 3 sdsB SDS degradation transcriptional activation protein Pseudomonas sp. (strain ATCC 19151)
B4SYF7 0.000381 45 32 2 98 3 hdfR HTH-type transcriptional regulator HdfR Salmonella newport (strain SL254)
P0A2Q0 0.000384 45 32 2 98 3 hdfR HTH-type transcriptional regulator HdfR Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
P0A2Q1 0.000384 45 32 2 98 3 hdfR HTH-type transcriptional regulator HdfR Salmonella typhi
B5BIR0 0.000384 45 32 2 98 3 hdfR HTH-type transcriptional regulator HdfR Salmonella paratyphi A (strain AKU_12601)
C0Q2U0 0.000384 45 32 2 98 3 hdfR HTH-type transcriptional regulator HdfR Salmonella paratyphi C (strain RKS4594)
A9MXD5 0.000384 45 32 2 98 3 hdfR HTH-type transcriptional regulator HdfR Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7)
Q5PJZ0 0.000384 45 32 2 98 3 hdfR HTH-type transcriptional regulator HdfR Salmonella paratyphi A (strain ATCC 9150 / SARB42)
B4TAZ8 0.000384 45 32 2 98 3 hdfR HTH-type transcriptional regulator HdfR Salmonella heidelberg (strain SL476)
B5EZ22 0.000384 45 32 2 98 3 hdfR HTH-type transcriptional regulator HdfR Salmonella agona (strain SL483)
O19892 0.000463 44 28 2 130 3 rbcR Probable RuBisCO transcriptional regulator Cyanidium caldarium
B1JQ39 0.000477 44 31 1 101 3 hdfR HTH-type transcriptional regulator HdfR Yersinia pseudotuberculosis serotype O:3 (strain YPIII)
Q66G51 0.000477 44 31 1 101 3 hdfR HTH-type transcriptional regulator HdfR Yersinia pseudotuberculosis serotype I (strain IP32953)
A4TRF4 0.000477 44 31 1 101 3 hdfR HTH-type transcriptional regulator HdfR Yersinia pestis (strain Pestoides F)
Q1CNN4 0.000477 44 31 1 101 3 hdfR HTH-type transcriptional regulator HdfR Yersinia pestis bv. Antiqua (strain Nepal516)
A9R8E7 0.000477 44 31 1 101 3 hdfR HTH-type transcriptional regulator HdfR Yersinia pestis bv. Antiqua (strain Angola)
Q8ZAA7 0.000477 44 31 1 101 3 hdfR HTH-type transcriptional regulator HdfR Yersinia pestis
B2JZG4 0.000477 44 31 1 101 3 hdfR HTH-type transcriptional regulator HdfR Yersinia pseudotuberculosis serotype IB (strain PB1/+)
Q1CBT5 0.000477 44 31 1 101 3 hdfR HTH-type transcriptional regulator HdfR Yersinia pestis bv. Antiqua (strain Antiqua)
A7FD20 0.000477 44 31 1 101 3 hdfR HTH-type transcriptional regulator HdfR Yersinia pseudotuberculosis serotype O:1b (strain IP 31758)
Q8Z8R3 0.000547 44 41 0 58 3 allS HTH-type transcriptional activator AllS Salmonella typhi
P73123 0.000551 44 28 4 144 3 rbcR Probable RuBisCO transcriptional regulator Synechocystis sp. (strain ATCC 27184 / PCC 6803 / Kazusa)
P52044 0.000684 44 24 0 89 3 ygfI Uncharacterized HTH-type transcriptional regulator YgfI Escherichia coli (strain K12)

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS01750
Feature type CDS
Gene -
Product LysR substrate-binding domain-containing protein
Location 388201 - 389088 (strand: -1)
Length 888 (nucleotides) / 295 (amino acids)

Contig

Accession term accessions NZ_VXKB01000001 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 2012992 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_3050
Orthogroup size 6
N. genomes 6

Actions

Genomic region

Domains

PF00126 Bacterial regulatory helix-turn-helix protein, lysR family
PF03466 LysR substrate binding domain

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG0583 Transcription (K) K DNA-binding transcriptional regulator, LysR family

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K03566 LysR family transcriptional regulator, glycine cleavage system transcriptional activator Biofilm formation - Escherichia coli -

Protein Sequence

MNAYPPMKALLAFEAAVRLGSFINAAESLHVTPGAVSQQIKKLEEELGVMLFYREIRKLTVTETGQKYYRLILPALEQIRSAGEKIRYSAHHQLTISMPPGLAAKWFSPRMSDFVRAFPGLDLHLNATAALVSLENDNVDLAVRYCSHSQVQPGWIRLTDAPCRLFCHPDYAARFTLNVPSDLTNVTLLHTTLYPYWDAWLRQHAGIMHGETPLPGGLHFDQILLAIDAAKHQQGVLIANDFLVEDELAQQTLQPLFPDLTWQPGKGFYLLRNRHSADPAMVSEVSDWLHHTFTH

Flanking regions ( +/- flanking 50bp)

GATTTAAATTGTCTCATGAAATACAAAAATTATTCTATAGGTGCTGTTCTGTGAATGCTTATCCCCCGATGAAAGCCTTGCTGGCGTTTGAAGCGGCCGTACGTCTCGGCAGTTTTATCAACGCCGCTGAATCCCTGCATGTGACGCCGGGTGCAGTCAGTCAGCAGATCAAAAAACTGGAGGAAGAGTTGGGTGTTATGCTCTTTTACAGGGAGATCCGCAAACTGACCGTGACGGAAACAGGTCAGAAATACTATCGCTTAATTCTGCCTGCGCTGGAGCAGATCCGCAGTGCGGGTGAAAAAATCCGTTACAGCGCACACCACCAGCTGACGATTTCGATGCCGCCGGGGCTTGCGGCAAAATGGTTCTCTCCACGGATGAGTGATTTTGTCAGGGCTTTTCCGGGGTTGGATCTTCATCTGAATGCCACGGCAGCGCTGGTTTCGCTGGAAAACGATAATGTGGATTTAGCGGTCCGTTATTGCAGCCATTCACAGGTACAACCAGGATGGATACGGCTGACTGACGCGCCCTGTCGCCTGTTTTGTCATCCGGATTACGCAGCGCGTTTTACACTCAACGTTCCGTCCGACCTGACAAACGTAACATTACTGCACACTACGCTGTATCCTTACTGGGATGCCTGGCTCAGGCAACATGCGGGTATAATGCACGGGGAAACCCCCCTTCCCGGCGGGCTGCATTTTGATCAGATCCTGCTGGCCATTGATGCCGCAAAACATCAACAGGGCGTGCTTATCGCCAATGATTTTCTGGTGGAAGATGAACTGGCGCAACAAACACTTCAGCCGCTTTTTCCGGATCTCACCTGGCAGCCCGGCAAAGGCTTTTATCTGCTGCGCAACCGCCACAGTGCCGATCCTGCGATGGTCAGTGAAGTCAGTGACTGGCTCCATCACACCTTCACTCACTGAGGGAATAAGATATACCCAACGTCATTCAGGATGCAGCCAACAAACCTGCA