K03111


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Kegg Orthologs K03111, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Kegg Orthologs within the database. 25 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Kegg Ortholog(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Kegg Orthologs has been clustered.
In red the Kegg Orthologs with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Kegg Orthologs prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Kegg Orthologs.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Kegg Orthologs prediction.

Description

External link K03111
KO K03111
Description single-strand DNA-binding protein

KO part of 3 pathways

DNA replication
Mismatch repair
Homologous recombination

KO part of 0 modules

Occurence in the database

K03111 is associated with 25 different proteins (see tab "Protein list" and "Profile")
The 25 proteins are classified into 2 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_38 PMI_RS04420 987453 987950 -1 ssb single-stranded DNA-binding protein Proteus mirabilis HI4320
1 group_38 PMI_RS12105 2676675 2677094 -1 ssb single-stranded DNA-binding protein Proteus mirabilis HI4320
2 group_38 PMI_RS13540 3004258 3004782 1 ssb1 single-stranded DNA-binding protein SSB1 Proteus mirabilis HI4320
3 group_110 FBDBKF_11145 54874 56037 -1 xerD Site-specific recombinase XerD Morganella morganii S1
4 group_110 EHELCC_05080 3431 4594 1 xerD Site-specific recombinase XerD Morganella morganii S2
5 group_110 NLDBIP_05400 44504 45667 1 xerD Site-specific recombinase XerD Morganella morganii S4
6 group_110 LHKJJB_02280 22028 23191 1 xerD Site-specific recombinase XerD Morganella morganii S3
7 group_110 HKOGLL_15660 45468 46631 1 xerD Site-specific recombinase XerD Morganella morganii S5
8 group_38 FBDBKF_00315 43090 43554 1 Single-stranded DNA-binding protein Morganella morganii S1
9 group_38 EHELCC_01230 265314 265778 -1 Single-stranded DNA-binding protein Morganella morganii S2
10 group_38 NLDBIP_02230 414358 414822 1 Single-stranded DNA-binding protein Morganella morganii S4
11 group_38 LHKJJB_03745 21599 22063 1 Single-stranded DNA-binding protein Morganella morganii S3
12 group_38 HKOGLL_03300 265519 265983 -1 Single-stranded DNA-binding protein Morganella morganii S5
13 group_110 FBDBKF_00360 46239 47390 1 Integrase Morganella morganii S1
14 group_110 EHELCC_01185 261478 262629 -1 Integrase Morganella morganii S2
15 group_110 NLDBIP_02275 417507 418658 1 Integrase Morganella morganii S4
16 group_110 LHKJJB_03790 24748 25899 1 Integrase Morganella morganii S3
17 group_110 HKOGLL_03255 261683 262834 -1 Integrase Morganella morganii S5
18 group_38 FBDBKF_17025 35684 36202 -1 ssb Single-stranded DNA-binding protein Morganella morganii S1
19 group_38 EHELCC_16565 32308 32826 1 ssb Single-stranded DNA-binding protein Morganella morganii S2
20 group_38 NLDBIP_16775 32308 32826 1 ssb Single-stranded DNA-binding protein Morganella morganii S4
21 group_38 LHKJJB_16695 35684 36202 -1 ssb Single-stranded DNA-binding protein Morganella morganii S3
22 group_38 HKOGLL_17660 35684 36202 -1 ssb Single-stranded DNA-binding protein Morganella morganii S5
23 group_110 F4V73_RS06340 1318441 1319592 1 site-specific integrase Morganella psychrotolerans
24 group_38 F4V73_RS18505 36585 37112 -1 single-stranded DNA-binding protein Morganella psychrotolerans