K01993


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Kegg Orthologs K01993, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Kegg Orthologs within the database. 14 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Kegg Ortholog(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Kegg Orthologs has been clustered.
In red the Kegg Orthologs with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Kegg Orthologs prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Kegg Orthologs.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Kegg Orthologs prediction.

Description

External link K01993
KO K01993
Description HlyD family secretion protein

KO part of 0 pathways

KO part of 0 modules

Occurence in the database

K01993 is associated with 14 different proteins (see tab "Protein list" and "Profile")
The 14 proteins are classified into 2 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_893 PMI_RS05900 1293788 1294861 1 biotin/lipoyl-binding protein Proteus mirabilis HI4320
1 group_1412 PMI_RS17105 3762520 3763491 1 efflux RND transporter periplasmic adaptor subunit Proteus mirabilis HI4320
2 group_893 FBDBKF_04665 132669 133742 1 emrA Multidrug resistance efflux pump EmrA Morganella morganii S1
3 group_893 EHELCC_05955 192126 193199 1 emrA Multidrug resistance efflux pump EmrA Morganella morganii S2
4 group_893 NLDBIP_06275 233191 234264 1 emrA Multidrug resistance efflux pump EmrA Morganella morganii S4
5 group_893 LHKJJB_03155 210715 211788 1 emrA Multidrug resistance efflux pump EmrA Morganella morganii S3
6 group_893 HKOGLL_06630 132579 133652 1 emrA Multidrug resistance efflux pump EmrA Morganella morganii S5
7 group_1412 FBDBKF_08725 127231 128202 1 emrA Multidrug resistance efflux pump EmrA Morganella morganii S1
8 group_1412 EHELCC_12800 35523 36494 -1 emrA Multidrug resistance efflux pump EmrA Morganella morganii S2
9 group_1412 NLDBIP_13140 35523 36494 -1 emrA Multidrug resistance efflux pump EmrA Morganella morganii S4
10 group_1412 LHKJJB_13415 125949 126920 1 emrA Multidrug resistance efflux pump EmrA Morganella morganii S3
11 group_1412 HKOGLL_11615 35523 36494 -1 emrA Multidrug resistance efflux pump EmrA Morganella morganii S5
12 group_893 F4V73_RS09130 1910350 1911423 1 HlyD family efflux transporter periplasmic adaptor subunit Morganella psychrotolerans
13 group_1412 F4V73_RS09945 95818 96789 1 efflux RND transporter periplasmic adaptor subunit Morganella psychrotolerans