Homologs in group_963

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_04665 FBDBKF_04665 74.2 Morganella morganii S1 emrA Multidrug resistance efflux pump EmrA
EHELCC_05955 EHELCC_05955 74.2 Morganella morganii S2 emrA Multidrug resistance efflux pump EmrA
NLDBIP_06275 NLDBIP_06275 74.2 Morganella morganii S4 emrA Multidrug resistance efflux pump EmrA
LHKJJB_03155 LHKJJB_03155 74.2 Morganella morganii S3 emrA Multidrug resistance efflux pump EmrA
HKOGLL_06630 HKOGLL_06630 74.2 Morganella morganii S5 emrA Multidrug resistance efflux pump EmrA
F4V73_RS09130 F4V73_RS09130 73.7 Morganella psychrotolerans - HlyD family efflux transporter periplasmic adaptor subunit

Distribution of the homologs in the orthogroup group_963

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_963

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P37626 5.31e-152 434 64 0 353 3 yhiI Uncharacterized protein YhiI Escherichia coli (strain K12)
A4W8D7 4.82e-29 117 29 5 300 3 Ent638_1286 UPF0194 membrane protein Ent638_1286 Enterobacter sp. (strain 638)
B2K8W1 6.79e-28 114 27 5 302 3 YPTS_1292 UPF0194 membrane protein YPTS_1292 Yersinia pseudotuberculosis serotype IB (strain PB1/+)
Q66D37 6.79e-28 114 27 5 302 3 YPTB1212 UPF0194 membrane protein YPTB1212 Yersinia pseudotuberculosis serotype I (strain IP32953)
A9MIT3 1.36e-27 114 30 6 306 3 ybhG UPF0194 membrane protein YbhG Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980)
Q93AA7 3.98e-27 112 27 5 306 3 YP_0975 UPF0194 membrane protein YP_0975 Yersinia pestis
B1JSP3 3.98e-27 112 27 5 306 3 YPK_2900 UPF0194 membrane protein YPK_2900 Yersinia pseudotuberculosis serotype O:3 (strain YPIII)
Q1CFT7 3.98e-27 112 27 5 306 3 YPN_2816 UPF0194 membrane protein YPN_2816 Yersinia pestis bv. Antiqua (strain Nepal516)
A7FKJ7 3.98e-27 112 27 5 306 3 YpsIP31758_2812 UPF0194 membrane protein YpsIP31758_2812 Yersinia pseudotuberculosis serotype O:1b (strain IP 31758)
Q1C912 3.98e-27 112 27 5 306 3 YPA_1093 UPF0194 membrane protein YPA_1093 Yersinia pestis bv. Antiqua (strain Antiqua)
A1JSL8 1.53e-25 108 26 5 317 3 YE2891 UPF0194 membrane protein YE2891 Yersinia enterocolitica serotype O:8 / biotype 1B (strain NCTC 13174 / 8081)
Q8ZQP0 1.83e-25 108 29 6 300 3 ybhG UPF0194 membrane protein YbhG Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
Q8Z879 1.83e-25 108 29 6 300 3 ybhG UPF0194 membrane protein YbhG Salmonella typhi
C0PX06 1.83e-25 108 29 6 300 3 ybhG UPF0194 membrane protein YbhG Salmonella paratyphi C (strain RKS4594)
B5QXS4 1.83e-25 108 29 6 300 3 ybhG UPF0194 membrane protein YbhG Salmonella enteritidis PT4 (strain P125109)
B5FP83 1.83e-25 108 29 6 300 3 ybhG UPF0194 membrane protein YbhG Salmonella dublin (strain CT_02021853)
Q57RE0 1.83e-25 108 29 6 300 3 ybhG UPF0194 membrane protein YbhG Salmonella choleraesuis (strain SC-B67)
B5F095 1.83e-25 108 29 6 300 3 ybhG UPF0194 membrane protein YbhG Salmonella agona (strain SL483)
B4TQW1 1.91e-25 107 29 6 300 3 ybhG UPF0194 membrane protein YbhG Salmonella schwarzengrund (strain CVM19633)
A9MSW1 1.91e-25 107 29 6 300 3 ybhG UPF0194 membrane protein YbhG Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7)
B4T074 1.91e-25 107 29 6 300 3 ybhG UPF0194 membrane protein YbhG Salmonella newport (strain SL254)
B4TC72 1.91e-25 107 29 6 300 3 ybhG UPF0194 membrane protein YbhG Salmonella heidelberg (strain SL476)
B5BC09 2.07e-25 107 29 6 300 3 ybhG UPF0194 membrane protein YbhG Salmonella paratyphi A (strain AKU_12601)
Q5PG34 2.07e-25 107 29 6 300 3 ybhG UPF0194 membrane protein YbhG Salmonella paratyphi A (strain ATCC 9150 / SARB42)
B5R785 2.09e-25 107 29 6 300 3 ybhG UPF0194 membrane protein YbhG Salmonella gallinarum (strain 287/91 / NCTC 13346)
Q323Z9 1.57e-24 105 29 5 297 3 ybhG UPF0194 membrane protein YbhG Shigella boydii serotype 4 (strain Sb227)
Q3Z3Z0 3.9e-24 104 29 5 299 3 ybhG UPF0194 membrane protein YbhG Shigella sonnei (strain Ss046)
Q0TJQ3 4.5e-24 104 29 5 297 3 ybhG UPF0194 membrane protein YbhG Escherichia coli O6:K15:H31 (strain 536 / UPEC)
Q8FJN6 4.91e-24 103 29 5 297 3 ybhG UPF0194 membrane protein YbhG Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
A1A936 5.32e-24 103 29 5 297 3 ybhG UPF0194 membrane protein YbhG Escherichia coli O1:K1 / APEC
B7MQP9 5.32e-24 103 29 5 297 3 ybhG UPF0194 membrane protein YbhG Escherichia coli O81 (strain ED1a)
B7MGQ3 5.32e-24 103 29 5 297 3 ybhG UPF0194 membrane protein YbhG Escherichia coli O45:K1 (strain S88 / ExPEC)
P75777 8.67e-24 103 29 5 297 2 ybhG UPF0194 membrane protein YbhG Escherichia coli (strain K12)
B1X7C5 8.67e-24 103 29 5 297 3 ybhG UPF0194 membrane protein YbhG Escherichia coli (strain K12 / DH10B)
C4ZXW7 8.67e-24 103 29 5 297 3 ybhG UPF0194 membrane protein YbhG Escherichia coli (strain K12 / MC4100 / BW2952)
Q1RED2 9.4e-24 103 29 5 297 3 ybhG UPF0194 membrane protein YbhG Escherichia coli (strain UTI89 / UPEC)
A7ZJK6 1.02e-23 103 29 5 297 3 ybhG UPF0194 membrane protein YbhG Escherichia coli O139:H28 (strain E24377A / ETEC)
B6I7V1 1.09e-23 103 29 5 297 3 ybhG UPF0194 membrane protein YbhG Escherichia coli (strain SE11)
B7M768 1.09e-23 103 29 5 297 3 ybhG UPF0194 membrane protein YbhG Escherichia coli O8 (strain IAI1)
B7LC78 1.09e-23 103 29 5 297 3 ybhG UPF0194 membrane protein YbhG Escherichia coli (strain 55989 / EAEC)
Q0T6G6 1.19e-23 103 29 5 297 3 ybhG UPF0194 membrane protein YbhG Shigella flexneri serotype 5b (strain 8401)
B1LM86 1.19e-23 103 29 5 297 3 ybhG UPF0194 membrane protein YbhG Escherichia coli (strain SMS-3-5 / SECEC)
B1IXH3 1.19e-23 103 29 5 297 3 ybhG UPF0194 membrane protein YbhG Escherichia coli (strain ATCC 8739 / DSM 1576 / NBRC 3972 / NCIMB 8545 / WDCM 00012 / Crooks)
A7ZY51 1.19e-23 103 29 5 297 3 ybhG UPF0194 membrane protein YbhG Escherichia coli O9:H4 (strain HS)
B5YS86 1.19e-23 103 29 5 297 3 ybhG UPF0194 membrane protein YbhG Escherichia coli O157:H7 (strain EC4115 / EHEC)
Q32I67 1.22e-23 102 29 5 297 3 ybhG UPF0194 membrane protein YbhG Shigella dysenteriae serotype 1 (strain Sd197)
B7LJW4 1.23e-23 102 29 5 297 3 ybhG UPF0194 membrane protein YbhG Escherichia fergusonii (strain ATCC 35469 / DSM 13698 / CCUG 18766 / IAM 14443 / JCM 21226 / LMG 7866 / NBRC 102419 / NCTC 12128 / CDC 0568-73)
B7NA95 1.23e-23 102 29 5 297 3 ybhG UPF0194 membrane protein YbhG Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC)
B7NNM5 1.23e-23 102 29 5 297 3 ybhG UPF0194 membrane protein YbhG Escherichia coli O7:K1 (strain IAI39 / ExPEC)
Q8X7Y9 1.23e-23 102 29 5 297 3 ybhG UPF0194 membrane protein YbhG Escherichia coli O157:H7
B7ULZ2 1.23e-23 102 29 5 297 3 ybhG UPF0194 membrane protein YbhG Escherichia coli O127:H6 (strain E2348/69 / EPEC)
Q83S36 1.29e-23 102 29 5 297 3 ybhG UPF0194 membrane protein YbhG Shigella flexneri
A8AIZ1 1.77e-23 102 27 5 300 3 CKO_02332 UPF0194 membrane protein CKO_02332 Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696)
Q9L9D4 6.29e-23 101 25 4 335 3 None UPF0194 membrane protein in asrC 5'region (Fragment) Acidithiobacillus ferridurans
Q92V44 5.21e-17 84 27 5 312 3 RB0873 UPF0194 membrane protein RB0873 Rhizobium meliloti (strain 1021)
P94851 1.94e-11 67 24 2 229 3 HP_1488 36 kDa antigen Helicobacter pylori (strain ATCC 700392 / 26695)
Q9ZJD1 4.89e-11 66 24 2 229 3 jhp_1381 36 kDa antigen Helicobacter pylori (strain J99 / ATCC 700824)
P0DPR6 2.45e-08 58 23 9 344 2 emrA Colistin resistance protein EmrA Acinetobacter baumannii (strain ATCC 17978 / DSM 105126 / CIP 53.77 / LMG 1025 / NCDC KC755 / 5377)
P76185 8.04e-07 53 28 7 189 3 ydhJ Uncharacterized protein YdhJ Escherichia coli (strain K12)
P32716 3.23e-06 52 23 4 236 2 mdtN Multidrug resistance protein MdtN Escherichia coli (strain K12)
Q83P86 3.54e-06 52 21 7 327 3 mdtN Multidrug resistance protein MdtN Shigella flexneri
Q8X5R2 4.98e-06 51 22 7 327 3 mdtN Multidrug resistance protein MdtN Escherichia coli O157:H7
P64177 5.14e-06 51 25 6 203 3 macA Macrolide export protein MacA Shigella flexneri
P64176 5.14e-06 51 25 6 203 3 macA Macrolide export protein MacA Escherichia coli O157:H7
Q8FAX1 6.17e-06 51 21 7 327 3 mdtN Multidrug resistance protein MdtN Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P75830 8.11e-06 50 26 6 203 1 macA Macrolide export protein MacA Escherichia coli (strain K12)
P58411 9.69e-06 50 23 3 211 3 macA Macrolide export protein MacA Yersinia pestis
Q668C7 7.13e-05 48 26 8 240 3 mdtA Multidrug resistance protein MdtA Yersinia pseudotuberculosis serotype I (strain IP32953)
B2K9L9 7.13e-05 48 26 8 240 3 mdtA Multidrug resistance protein MdtA Yersinia pseudotuberculosis serotype IB (strain PB1/+)
B1JSD5 7.65e-05 48 26 8 240 3 mdtA Multidrug resistance protein MdtA Yersinia pseudotuberculosis serotype O:3 (strain YPIII)
A4TMR2 8.74e-05 47 26 8 240 3 mdtA Multidrug resistance protein MdtA Yersinia pestis (strain Pestoides F)
Q1CK59 8.74e-05 47 26 8 240 3 mdtA Multidrug resistance protein MdtA Yersinia pestis bv. Antiqua (strain Nepal516)
Q8ZCW1 8.74e-05 47 26 8 240 3 mdtA Multidrug resistance protein MdtA Yersinia pestis
Q1C5M1 8.74e-05 47 26 8 240 3 mdtA Multidrug resistance protein MdtA Yersinia pestis bv. Antiqua (strain Antiqua)
D3V7P2 0.000214 46 24 11 295 3 mdtA Multidrug resistance protein MdtA Xenorhabdus bovienii (strain SS-2004)
P43505 0.000437 45 29 3 121 3 mtrC Membrane fusion protein MtrC Neisseria gonorrhoeae
A7FG18 0.000521 45 26 8 240 3 mdtA Multidrug resistance protein MdtA Yersinia pseudotuberculosis serotype O:1b (strain IP 31758)
P27303 0.000718 45 23 8 267 1 emrA Multidrug export protein EmrA Escherichia coli (strain K12)
A1JKX1 0.000794 44 25 8 239 3 mdtA Multidrug resistance protein MdtA Yersinia enterocolitica serotype O:8 / biotype 1B (strain NCTC 13174 / 8081)
C9XVZ5 0.000852 44 25 6 192 3 mdtA Multidrug resistance protein MdtA Cronobacter turicensis (strain DSM 18703 / CCUG 55852 / LMG 23827 / z3032)
C6DBC6 0.001 44 24 4 210 3 mdtA Multidrug resistance protein MdtA Pectobacterium carotovorum subsp. carotovorum (strain PC1)

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS05900
Feature type CDS
Gene -
Product biotin/lipoyl-binding protein
Location 1293788 - 1294861 (strand: 1)
Length 1074 (nucleotides) / 357 (amino acids)
In genomic island -

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_963
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF13437 HlyD family secretion protein
PF13533 Biotin-lipoyl like

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG1566 Defense mechanisms (V) V Multidrug resistance efflux pump EmrA

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K01993 HlyD family secretion protein - -

Protein Sequence

MKNQKTNRFFVYGIIIVAIIAAGIFWWKTQSPALPDGFAQSNGRIEATEIDISTKTPGRIDTILVKEGDFVKAGEVLATMDTRTLKEQLHEVQAQLEQAKSSVMTAESALSQRQSEQVAAQAVVRQRIAELDASVKRLNRSRALVKTKAISIQQLDDDIARTEGARAAVEAAKAQVTATIAAIDSAKSGIIQAKTKVDAATATERRIMAELDDSILKAPRNGRVQYRVAEPGEVLGAGGRVLNMVDLSDVYMTFFLPTEAAGKAALGSDVHIILDAAPHIVIPAKTTYVASVAQFTPKTVETDNERLKLMFRVRARISPELLEKHLEYVKTGLPGRAYIRLDNSQPWPTDLEVKLPQ

Flanking regions ( +/- flanking 50bp)

ATCACAAAAAATTGGGTTATTTATGGCAAAAGGAAGGTTAAATAATTTATATGAAAAATCAAAAAACGAATCGTTTTTTTGTTTACGGCATTATTATTGTTGCAATTATTGCAGCAGGTATTTTTTGGTGGAAAACACAATCACCAGCACTCCCTGATGGGTTTGCTCAAAGTAATGGGAGAATTGAAGCTACTGAAATTGATATTTCAACCAAAACACCAGGAAGAATTGACACTATTTTGGTTAAAGAGGGGGATTTTGTTAAAGCGGGTGAAGTGTTGGCAACAATGGATACTCGTACCTTAAAAGAGCAACTTCATGAAGTTCAAGCCCAACTAGAGCAAGCCAAAAGTAGCGTTATGACGGCAGAGTCGGCACTTTCTCAACGTCAAAGTGAGCAAGTTGCAGCGCAGGCGGTTGTTCGTCAGCGTATTGCAGAGCTTGACGCATCAGTAAAACGCCTTAACCGATCTCGAGCATTAGTTAAAACAAAAGCAATTTCCATTCAACAACTGGATGATGATATAGCAAGAACCGAAGGGGCTCGTGCTGCTGTTGAAGCTGCAAAAGCACAAGTGACTGCAACCATTGCGGCAATTGATTCGGCAAAGTCTGGAATTATTCAAGCAAAAACTAAAGTTGATGCAGCAACAGCTACCGAACGACGTATTATGGCTGAGTTGGATGATAGTATCTTAAAAGCTCCTCGTAATGGCCGTGTACAATATCGTGTTGCGGAACCCGGTGAAGTGCTAGGCGCTGGCGGTCGAGTGTTAAATATGGTCGACCTTAGTGATGTGTATATGACATTCTTTTTGCCAACTGAAGCCGCTGGTAAAGCAGCCTTAGGCAGTGATGTCCATATTATTTTGGACGCAGCCCCACATATTGTGATCCCTGCGAAAACGACTTATGTTGCCAGTGTTGCACAGTTTACCCCTAAAACGGTTGAAACTGACAATGAACGTTTGAAACTGATGTTTCGTGTAAGAGCGAGGATCTCCCCTGAATTACTAGAGAAACACCTTGAATATGTCAAAACAGGTTTACCGGGACGTGCCTATATTCGCTTAGATAATAGCCAACCTTGGCCGACTGATTTAGAGGTGAAATTACCACAATGAGTCAACTAATGAGAACGCAAAGTCATTCTCATATCATTGAATTGACTCAT