Orthogroup:group_1468


Homologs in group_1468

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_09420 FBDBKF_09420 Morganella morganii S1 ahpC alkyl hydroperoxide reductase subunit C
EHELCC_09990 EHELCC_09990 Morganella morganii S2 ahpC alkyl hydroperoxide reductase subunit C
NLDBIP_10335 NLDBIP_10335 Morganella morganii S4 ahpC alkyl hydroperoxide reductase subunit C
LHKJJB_11020 LHKJJB_11020 Morganella morganii S3 ahpC alkyl hydroperoxide reductase subunit C
HKOGLL_14080 HKOGLL_14080 Morganella morganii S5 ahpC alkyl hydroperoxide reductase subunit C
F4V73_RS10545 F4V73_RS10545 Morganella psychrotolerans ahpC alkyl hydroperoxide reductase subunit C
PMI_RS05850 PMI_RS05850 Proteus mirabilis HI4320 ahpC alkyl hydroperoxide reductase subunit C

Distribution of group_1468 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_1468 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_1468

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_1468.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 ahpC 7

Product

# Product Occurence
1 alkyl hydroperoxide reductase subunit C 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0450 7 V Defense mechanisms (V) Alkyl hydroperoxide reductase subunit AhpC (peroxiredoxin)

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K24119 7 NADH-dependent peroxiredoxin subunit C [EC:1.11.1.26] - -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00578 7 AhpC/TSA family
PF10417 7 C-terminal domain of 1-Cys peroxiredoxin

Annotations of the 171 SwissProt hits

Annotation Number of occurrences
1-Cys peroxiredoxin 4
1-Cys peroxiredoxin A 2
1-Cys peroxiredoxin B 2
1-Cys peroxiredoxin PER1 4
2-Cys peroxiredoxin BAS1, chloroplastic 3
2-Cys peroxiredoxin BAS1, chloroplastic (Fragment) 2
2-Cys peroxiredoxin BAS1-like, chloroplastic 1
2-cysteine peroxiredoxin, chloroplastic 1
Alkyl hydroperoxide reductase C 30
Alkyl hydroperoxide reductase C (Fragment) 3
Alkyl hydroperoxide reductase E 3
Peroxiredoxin 28
Peroxiredoxin 1 6
Peroxiredoxin 2 7
Peroxiredoxin Bcp 3
Peroxiredoxin PRX1, mitochondrial 1
Peroxiredoxin Q, chloroplastic 6
Peroxiredoxin Q, chloroplastic (Fragment) 1
Peroxiredoxin TSA1 1
Peroxiredoxin TSA1-A 1
Peroxiredoxin TSA1-B 1
Peroxiredoxin TSA2 1
Peroxiredoxin prdx-2 1
Peroxiredoxin tpx1 1
Peroxiredoxin y4vD 1
Peroxiredoxin-1 8
Peroxiredoxin-2 7
Peroxiredoxin-2 (Fragment) 1
Peroxiredoxin-4 5
Peroxiredoxin-6 8
Probable 1-Cys peroxiredoxin 1
Probable 1-Cys peroxiredoxin (Fragment) 1
Probable peroxiredoxin prdx-3 1
Putative peroxiredoxin 1
Putative peroxiredoxin Q, chloroplastic 1
Putative peroxiredoxin YkuU 1
Putative peroxiredoxin bcp 6
Putative peroxiredoxin in rubredoxin operon 1
Putative peroxiredoxin sll0755 1
Putative peroxiredoxin ycf42 3
Putative thioredoxin peroxidase 1
Selenocysteine-containing peroxiredoxin PrxU 1
Thioredoxin peroxidase 3
Thioredoxin-dependent peroxide reductase, mitochondrial 6

Protein length

Unique protein length 187

Protein length distribution