COG2831


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG2831, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 16 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description Hemolysin activation/secretion protein
Function(s) descr. Intracellular trafficking, secretion, and vesicular transport (U)

Occurence in the database

COG2831 is associated with 16 different proteins (see tab "Protein list" and "Profile")
The 16 proteins are classified into 2 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_345 FBDBKF_11995 48640 50193 -1 fhaC Hemolysin activation/secretion protein Morganella morganii S1
1 group_362 FBDBKF_13005 104961 106649 -1 fhaC Hemolysin activation/secretion protein Morganella morganii S1
2 group_362 EHELCC_06320 274993 276681 -1 fhaC Hemolysin activation/secretion protein Morganella morganii S2
3 group_345 EHELCC_14310 84512 86065 1 fhaC Hemolysin activation/secretion protein Morganella morganii S2
4 group_362 NLDBIP_06640 316058 317746 -1 fhaC Hemolysin activation/secretion protein Morganella morganii S4
5 group_345 NLDBIP_15405 88449 90002 1 fhaC Hemolysin activation/secretion protein Morganella morganii S4
6 group_362 LHKJJB_03520 293582 295270 -1 fhaC Hemolysin activation/secretion protein Morganella morganii S3
7 group_345 LHKJJB_15205 48640 50193 -1 fhaC Hemolysin activation/secretion protein Morganella morganii S3
8 group_362 HKOGLL_06995 215446 217134 -1 fhaC Hemolysin activation/secretion protein Morganella morganii S5
9 group_345 HKOGLL_14325 35303 36856 -1 fhaC Hemolysin activation/secretion protein Morganella morganii S5
10 group_345 F4V73_RS12500 90612 92354 -1 ShlB/FhaC/HecB family hemolysin secretion/activation protein Morganella psychrotolerans
11 group_345 F4V73_RS14660 166125 167675 1 ShlB/FhaC/HecB family hemolysin secretion/activation protein Morganella psychrotolerans
12 group_362 F4V73_RS16190 45330 47039 -1 ShlB/FhaC/HecB family hemolysin secretion/activation protein Morganella psychrotolerans
13 group_362 PMI_RS02920 639658 641217 1 ShlB/FhaC/HecB family hemolysin secretion/activation protein Proteus mirabilis HI4320
14 group_362 PMI_RS10135 2213247 2214932 1 hpmB hemolysin secretion/activation protein HpmB Proteus mirabilis HI4320
15 group_345 PMI_RS14070 3124654 3126336 -1 ShlB/FhaC/HecB family hemolysin secretion/activation protein Proteus mirabilis HI4320