Homologs in group_362

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_13005 FBDBKF_13005 47.8 Morganella morganii S1 fhaC Hemolysin activation/secretion protein
EHELCC_06320 EHELCC_06320 47.8 Morganella morganii S2 fhaC Hemolysin activation/secretion protein
NLDBIP_06640 NLDBIP_06640 47.8 Morganella morganii S4 fhaC Hemolysin activation/secretion protein
LHKJJB_03520 LHKJJB_03520 47.8 Morganella morganii S3 fhaC Hemolysin activation/secretion protein
HKOGLL_06995 HKOGLL_06995 47.8 Morganella morganii S5 fhaC Hemolysin activation/secretion protein
F4V73_RS16190 F4V73_RS16190 46.0 Morganella psychrotolerans - ShlB/FhaC/HecB family hemolysin secretion/activation protein
PMI_RS02920 PMI_RS02920 28.8 Proteus mirabilis HI4320 - ShlB/FhaC/HecB family hemolysin secretion/activation protein

Distribution of the homologs in the orthogroup group_362

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_362

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P16465 0.0 1136 99 0 561 3 hpmB Hemolysin transporter protein HpmB Proteus mirabilis
P15321 0.0 632 55 3 563 1 shlB Hemolysin transporter protein ShlB Serratia marcescens
Q0T962 1.03e-44 170 30 12 445 3 cdiB Outer membrane transporter CdiB Escherichia coli O6:K15:H31 (strain 536 / UPEC)
Q3YL97 1.3e-44 169 30 15 447 1 cdiB Outer membrane transporter CdiB Escherichia coli
P0DMJ8 1.36e-39 155 29 10 408 3 cdiB2 Outer membrane transporter CdiB-2 Burkholderia pseudomallei (strain 1026b)
E0SDG9 2.34e-38 151 27 15 507 3 cdiB Outer membrane transporter CdiB Dickeya dadantii (strain 3937)
Q7CGD8 3.62e-29 125 23 11 487 3 cdib Outer membrane transporter CdiB Yersinia pestis
B0UUL1 4.67e-22 103 23 19 543 3 ibpB Outer membrane transporter protein IbpB Histophilus somni (strain 2336)
P35077 5.46e-19 94 22 15 530 1 fhaC Filamentous hemagglutinin transporter protein FhaC Bordetella pertussis (strain Tohama I / ATCC BAA-589 / NCTC 13251)

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS10135
Feature type CDS
Gene hpmB
Product hemolysin secretion/activation protein HpmB
Location 2213247 - 2214932 (strand: 1)
Length 1686 (nucleotides) / 561 (amino acids)

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_362
Orthogroup size 8
N. genomes 7

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Genomic region

Domains

PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB
PF08479 POTRA domain, ShlB-type
PF17287 POTRA domain

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG2831 Intracellular trafficking, secretion, and vesicular transport (U) U Hemolysin activation/secretion protein

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K11017 hemolysin activation/secretion protein Bacterial secretion system -

Virulence factor Annotation(s)

VF gene ID Protein VF ID Category
VFG042330 hemolysin secretion/activation protein HpmB VF1292 Effector delivery system

Protein Sequence

MKKKVVLLTLLSCFSTSGLSANETGNLGSISESRRALQDSQREINQLIEQNRYQQLQEKAVNISPTPTLITESEHCLPIKGVYIQGITLLTEKDLNSLSPLPDQCIKSADINRLVKELTQRYLQHGYITARIQFLRPNQHGELGLYAIEGFVERIEGGDRGVNTTLLFPRIKGQPLKLATLDQGLDQANRLQSNKVTVDILPGTELGGSVIKLSNQRKSPWHLNIASDNYGQKNSGRWLIRTNASLDSPLGLSDFVSLNANITTDNPNTRFNRAYTLLYSIPYGGFTFSSFGSYSEYQFHQKLQTRTVSLYGDTTQVGIRGDYAFSRSQKQIDTLNIQVTHKRIRNYFSQIRLDLSSPKLTTIELGINHLQIIPNGVLSTNLSVEKAVGWFGAEETPYITNGNGNDYRFTKVKLFANWYQRFSLWRSTFLFNSTFLGQYSHDTLPGVEWLSLTDKNAIRGFDQSTLSGDNGGYLRNTLSYPYRLNHFSITPRIGVDIGQVKQHGNYKGWQGGYGLSSGLNIQYQQAQLDLEVAKGELLYHQTNSNKTKDPTQLLVKFSYLF

Flanking regions ( +/- flanking 50bp)

ATTAAAGCCCTATTATTATATTTGAATTAATACCTTTATCTCGAGGTAAAATGAAAAAAAAAGTTGTTTTATTAACACTATTAAGCTGTTTTTCTACCAGTGGATTAAGCGCAAATGAAACAGGAAATTTAGGCTCAATCAGTGAATCAAGGCGTGCATTGCAAGATAGCCAACGTGAAATTAATCAATTAATAGAACAAAATCGCTATCAGCAACTGCAAGAAAAAGCGGTAAATATTTCACCTACCCCAACTTTAATTACTGAGTCAGAACACTGTTTGCCTATAAAAGGCGTTTATATTCAAGGTATTACTTTACTTACTGAGAAGGATCTCAATTCATTATCTCCATTACCAGATCAATGTATTAAGAGTGCTGATATTAATCGCCTCGTGAAAGAACTCACTCAGCGTTATCTTCAACATGGTTATATTACTGCACGTATCCAATTTTTACGTCCTAACCAACATGGCGAATTAGGTCTGTATGCTATTGAAGGGTTTGTTGAACGTATTGAAGGAGGTGATCGAGGTGTTAACACCACACTACTATTTCCTCGAATCAAAGGGCAACCATTAAAACTCGCTACACTCGATCAAGGCTTAGATCAAGCTAACCGCTTGCAATCAAATAAAGTCACAGTGGATATTCTTCCCGGTACCGAATTGGGGGGCTCTGTCATTAAGTTGTCTAATCAACGAAAATCACCTTGGCATCTCAATATCGCTAGTGACAATTATGGACAGAAAAATTCAGGCCGCTGGTTAATACGAACGAATGCTAGTTTAGATAGCCCATTAGGTTTATCTGATTTTGTAAGCTTAAATGCCAACATAACAACAGATAACCCGAATACCCGTTTTAATCGCGCTTATACTTTGCTCTATTCAATTCCTTATGGTGGTTTTACTTTTAGCTCTTTTGGTAGTTATTCGGAGTACCAATTTCACCAAAAATTACAAACACGTACTGTCAGCTTATATGGCGATACCACTCAAGTAGGTATTAGAGGCGATTATGCTTTTAGCCGTAGCCAAAAACAAATTGATACCTTAAATATTCAAGTCACTCATAAACGTATACGCAACTACTTTAGCCAAATTCGTTTAGATCTCAGTAGCCCTAAATTAACCACGATTGAATTAGGGATTAATCATTTGCAGATTATTCCAAATGGCGTATTGAGCACTAATTTGAGTGTTGAAAAAGCGGTCGGCTGGTTTGGCGCAGAGGAAACACCCTATATCACTAACGGTAATGGTAACGACTATCGCTTTACAAAAGTTAAGCTATTTGCCAATTGGTATCAACGCTTTTCTCTATGGCGTTCTACATTTTTATTCAATAGTACTTTTTTAGGCCAATACAGCCACGATACACTCCCCGGCGTTGAATGGCTAAGTTTAACAGACAAAAACGCTATTCGTGGTTTTGATCAAAGCACACTTTCTGGTGATAACGGTGGCTATTTACGCAATACCCTCTCCTATCCCTATCGACTTAACCACTTTTCTATCACACCTCGTATAGGGGTAGATATCGGTCAAGTAAAACAACATGGTAACTACAAAGGATGGCAAGGTGGTTACGGCCTAAGCTCCGGCTTAAATATTCAATATCAACAAGCACAACTCGACCTTGAAGTTGCAAAAGGCGAGTTACTGTATCACCAAACAAATTCCAATAAAACCAAAGATCCTACTCAACTACTGGTTAAATTTTCATACTTATTTTGATCTACATTCATAGCAACAAATGGAGATAACTCTATGAAATCAAAAAACTT