Homologs in group_345

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7 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_11995 FBDBKF_11995 24.3 Morganella morganii S1 fhaC Hemolysin activation/secretion protein
EHELCC_14310 EHELCC_14310 24.3 Morganella morganii S2 fhaC Hemolysin activation/secretion protein
NLDBIP_15405 NLDBIP_15405 24.3 Morganella morganii S4 fhaC Hemolysin activation/secretion protein
LHKJJB_15205 LHKJJB_15205 24.3 Morganella morganii S3 fhaC Hemolysin activation/secretion protein
HKOGLL_14325 HKOGLL_14325 24.3 Morganella morganii S5 fhaC Hemolysin activation/secretion protein
F4V73_RS12500 F4V73_RS12500 25.1 Morganella psychrotolerans - ShlB/FhaC/HecB family hemolysin secretion/activation protein
F4V73_RS14660 F4V73_RS14660 24.4 Morganella psychrotolerans - ShlB/FhaC/HecB family hemolysin secretion/activation protein

Distribution of the homologs in the orthogroup group_345

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_345

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
Q7CGD8 1.43e-28 123 22 12 573 3 cdib Outer membrane transporter CdiB Yersinia pestis
P0DMJ8 1.62e-20 99 23 13 510 3 cdiB2 Outer membrane transporter CdiB-2 Burkholderia pseudomallei (strain 1026b)
Q0T962 3.16e-20 97 24 14 501 3 cdiB Outer membrane transporter CdiB Escherichia coli O6:K15:H31 (strain 536 / UPEC)
Q3YL97 4.36e-19 94 24 14 501 1 cdiB Outer membrane transporter CdiB Escherichia coli
E0SDG9 4.36e-17 88 23 16 488 3 cdiB Outer membrane transporter CdiB Dickeya dadantii (strain 3937)
P16465 3.07e-06 53 22 9 376 3 hpmB Hemolysin transporter protein HpmB Proteus mirabilis
P35077 4.71e-05 50 22 12 361 1 fhaC Filamentous hemagglutinin transporter protein FhaC Bordetella pertussis (strain Tohama I / ATCC BAA-589 / NCTC 13251)

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS14070
Feature type CDS
Gene -
Product ShlB/FhaC/HecB family hemolysin secretion/activation protein
Location 3124654 - 3126336 (strand: -1)
Length 1683 (nucleotides) / 560 (amino acids)

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_345
Orthogroup size 8
N. genomes 7

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Genomic region

Domains

PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB
PF17287 POTRA domain

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG2831 Intracellular trafficking, secretion, and vesicular transport (U) U Hemolysin activation/secretion protein

Protein Sequence

MRIELSILIYCILWCCAFFSVANESHIDPPVPVDLPTETQLRDQLLQQNDNVSLVNLAPQNKREFITPSVHCFSIKQVKLHHLDEFSSSSLQRQVAKWQAELVGHCQSQALLEQDINILNALLYDAGYVTSEVGKVDLYADDEVLDITLNVGRVQDIVSEAPTDKRYLISQAVPVKKGDILNVKDIEQGADNFRSRPNSNVKIQIEPSSKEHESIISLSQVGKRTMAGSVSIDNKEQKIYGDLFGTTRLSFGNLAQLNDTLMVILSSQLDTLKSRGIKKQIFLWQVPYHYWRATLFGYDIGSKMRVSEVTKELQKTRQQLLSFEIQRQFRPSTQRTVTLSGGIQYYTYRNEVSGYRLSVHERRSPYVNAGIEQNYRFMRGGYLNAKLHYKQSVFIPGARLSPIDSLNGVPIFNLNFDALIPFKITSQQFFYQPEMIFQLTRSDIDGLLDKATIGGLYSVYGFESGKGYSDANQFVSRHKVTWLTPLNNQMLFSAIDYGSVSEDRKKIFYNKNKYLVGAAIGLEGSFKKLSYQLVWSIPLSAPSSREATGSQFNFNTQFNF

Flanking regions ( +/- flanking 50bp)

CTTTACATATACATAGCACTCCTATTTCCGGTGATAAGAGTGTAAATTGAATGCGTATTGAGTTGTCTATTTTAATCTATTGTATTTTATGGTGTTGTGCTTTTTTTTCTGTAGCGAATGAAAGTCATATCGATCCCCCTGTACCAGTAGATTTACCGACAGAAACACAACTTAGAGATCAATTACTACAACAAAATGACAATGTCTCTTTAGTGAACTTAGCACCACAAAATAAAAGGGAATTTATCACACCTTCTGTACATTGTTTTTCAATCAAACAGGTAAAACTCCATCATCTCGATGAGTTTTCTTCCTCATCACTGCAACGCCAAGTGGCAAAATGGCAAGCTGAATTAGTTGGGCATTGTCAGTCACAGGCATTGTTAGAACAAGATATCAATATTCTGAATGCGCTGCTTTATGATGCAGGTTATGTGACCAGTGAGGTGGGTAAAGTTGATCTTTATGCCGATGACGAGGTATTGGATATCACATTAAATGTCGGGAGAGTGCAAGACATTGTTTCCGAAGCCCCGACAGATAAACGCTATTTGATTTCACAGGCAGTGCCTGTCAAAAAAGGTGATATTTTAAACGTTAAAGATATTGAACAGGGGGCTGACAATTTCAGATCCCGTCCTAATAGTAATGTCAAAATTCAGATAGAACCCTCGTCAAAAGAACATGAGTCAATTATTTCTCTTTCTCAAGTGGGAAAAAGGACAATGGCAGGCTCGGTATCGATTGATAATAAGGAGCAGAAAATTTACGGAGATCTATTTGGTACTACAAGGCTAAGCTTTGGTAATCTAGCGCAACTTAATGATACTTTAATGGTTATTCTTTCAAGTCAACTCGATACCTTAAAATCAAGAGGCATCAAAAAGCAGATCTTTTTATGGCAAGTACCTTATCATTATTGGCGTGCGACATTATTTGGTTATGATATTGGTTCAAAAATGAGAGTCTCTGAAGTGACAAAAGAGTTACAAAAAACGCGTCAACAGCTTCTTTCTTTTGAGATCCAGCGCCAATTTAGACCTTCAACACAGCGTACGGTGACTTTAAGTGGTGGAATACAATATTACACTTATCGCAATGAAGTGTCAGGCTATCGCTTATCAGTCCATGAGCGTCGCAGTCCTTATGTTAATGCGGGTATTGAGCAAAATTATCGCTTTATGAGAGGGGGTTACCTTAATGCTAAACTTCATTATAAGCAGAGTGTTTTTATTCCTGGCGCAAGACTATCACCGATAGATTCCCTTAATGGTGTACCCATTTTTAATCTTAATTTTGATGCATTAATTCCTTTTAAAATCACTTCACAGCAATTTTTTTATCAACCAGAAATGATATTTCAACTGACTCGCTCAGATATTGATGGATTACTTGATAAAGCAACCATTGGTGGTCTGTATAGCGTGTATGGTTTTGAGTCCGGCAAAGGTTATTCTGATGCCAATCAGTTTGTTTCCCGACATAAAGTTACTTGGCTTACACCCTTGAATAACCAAATGCTATTTTCCGCCATAGATTATGGTTCCGTTTCAGAAGATAGAAAAAAAATTTTTTATAATAAAAATAAATATTTAGTTGGTGCGGCAATAGGATTAGAAGGTAGCTTTAAGAAACTAAGTTATCAGTTAGTATGGAGCATACCGTTATCAGCCCCTTCTAGTCGAGAAGCAACAGGATCGCAGTTTAATTTTAATACCCAATTTAACTTCTGATTATGGTGATTTATTTTATATTTTTTACTACTGTTTTTATAAATTATTTA