Homologs in group_330

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_13005 FBDBKF_13005 27.1 Morganella morganii S1 fhaC Hemolysin activation/secretion protein
EHELCC_06320 EHELCC_06320 27.1 Morganella morganii S2 fhaC Hemolysin activation/secretion protein
NLDBIP_06640 NLDBIP_06640 27.1 Morganella morganii S4 fhaC Hemolysin activation/secretion protein
LHKJJB_03520 LHKJJB_03520 27.1 Morganella morganii S3 fhaC Hemolysin activation/secretion protein
HKOGLL_06995 HKOGLL_06995 27.1 Morganella morganii S5 fhaC Hemolysin activation/secretion protein
F4V73_RS16190 F4V73_RS16190 27.4 Morganella psychrotolerans - ShlB/FhaC/HecB family hemolysin secretion/activation protein
PMI_RS10135 PMI_RS10135 28.8 Proteus mirabilis HI4320 hpmB hemolysin secretion/activation protein HpmB

Distribution of the homologs in the orthogroup group_330

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_330

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
E0SDG9 2.78e-87 282 32 4 473 3 cdiB Outer membrane transporter CdiB Dickeya dadantii (strain 3937)
Q0T962 2.66e-79 262 30 8 490 3 cdiB Outer membrane transporter CdiB Escherichia coli O6:K15:H31 (strain 536 / UPEC)
Q3YL97 3.65e-79 261 30 8 490 1 cdiB Outer membrane transporter CdiB Escherichia coli
P0DMJ8 1.31e-35 143 25 13 436 3 cdiB2 Outer membrane transporter CdiB-2 Burkholderia pseudomallei (strain 1026b)
P16465 2.24e-35 142 28 9 418 3 hpmB Hemolysin transporter protein HpmB Proteus mirabilis
P15321 1.15e-34 140 28 11 418 1 shlB Hemolysin transporter protein ShlB Serratia marcescens
Q7CGD8 4.09e-28 121 24 12 442 3 cdib Outer membrane transporter CdiB Yersinia pestis
P35077 6.05e-16 84 22 11 445 1 fhaC Filamentous hemagglutinin transporter protein FhaC Bordetella pertussis (strain Tohama I / ATCC BAA-589 / NCTC 13251)
B0UUL1 7.85e-13 74 22 13 462 3 ibpB Outer membrane transporter protein IbpB Histophilus somni (strain 2336)
Q4QNS5 2.72e-11 69 20 11 402 3 hxuB Heme/hemopexin transporter protein HuxB Haemophilus influenzae (strain 86-028NP)
P44601 6.94e-11 68 21 13 403 3 hxuB Heme/hemopexin transporter protein HuxB Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
P45356 9.26e-11 67 20 12 402 1 hxuB Heme/hemopexin transporter protein HuxB Haemophilus influenzae

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS02920
Feature type CDS
Gene -
Product ShlB/FhaC/HecB family hemolysin secretion/activation protein
Location 639658 - 641217 (strand: 1)
Length 1560 (nucleotides) / 519 (amino acids)
In genomic island -

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_330
Orthogroup size 8
N. genomes 7

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Genomic region

Domains

PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB
PF08479 POTRA domain, ShlB-type
PF17287 POTRA domain

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG2831 Intracellular trafficking, secretion, and vesicular transport (U) U Hemolysin activation/secretion protein

Protein Sequence

MNNIKRECVNYLLGLMALFLLTISKITFAEINNNVNNCFLINEIKIERNGLLTNKAQKELISKYINKCLTLSDMQHIIKSMTNAYIEKGYITSQAFIADQDLSNHQLTINVIEGKIKSIFIDNMTSPMVDILFPSYQDKRLNLRELEHGLEQLNRLTTSQYRLDIQPSDRIGYSTIFIYKKNKTHPFRNQLTIDNSGSKATGEMLLTNTTTIDSLFGFGEQWDLSLNSNTDLLHSHYYRGYTASINIPYGYWFYQYQLSYNRSSHFIKSYSNKYIYKSINTNQQVDISRLLYRDSKKKIILKGILKHKKVKTELAKQPILINSPTLTSLSLAPQYHFNLTSGYLSINPSAEIGLSFFGASPDYIAENSPRSHYRKLSLNIHYQYLFPYSVSYITSFYGQYTSDNLYSVEKISIDGLNAVRGAKQNKLSANRGLYWRNEINTPWINSFLGQWRFITAVDYGVIYSDQYETKQQSLLAGAMGLSFYRSPFSSQLLINKPFIYPKWLNANQWSLSWSISFAL

Flanking regions ( +/- flanking 50bp)

TGGGCAAGATTATTTATGTTATTTTAATAAAAACATAAGGACTCGTTTATATGAATAACATTAAAAGGGAATGTGTTAACTATTTATTAGGATTAATGGCGCTATTTTTATTAACGATAAGTAAGATAACTTTTGCAGAAATAAATAATAATGTAAATAATTGCTTCTTAATTAATGAAATAAAAATAGAAAGGAATGGTTTATTAACTAATAAGGCACAAAAAGAATTAATATCTAAATATATAAATAAATGTTTAACATTAAGTGATATGCAACATATCATTAAATCAATGACTAATGCGTATATTGAAAAAGGCTATATTACTTCACAAGCTTTTATTGCCGATCAAGATCTCTCAAATCATCAGTTAACCATTAACGTAATTGAAGGAAAGATAAAATCAATCTTTATTGATAATATGACTTCCCCCATGGTTGATATTCTATTTCCTTCATATCAAGATAAACGACTTAATTTACGTGAGTTAGAGCATGGGCTTGAACAACTAAATCGATTAACAACATCACAATATAGATTAGATATTCAACCTAGTGACAGGATAGGATACTCGACTATTTTTATTTATAAGAAAAACAAAACGCATCCTTTCAGAAATCAACTTACTATTGATAATTCAGGTTCAAAAGCAACAGGTGAAATGTTACTGACGAATACCACAACAATAGATTCGTTATTTGGATTTGGAGAGCAGTGGGATCTCTCCTTAAACAGTAATACAGATTTATTACATTCACATTATTATAGAGGCTATACAGCGAGTATAAATATTCCCTATGGCTATTGGTTTTATCAATATCAGTTATCTTATAACCGTTCTTCTCATTTTATTAAAAGTTATAGTAATAAATATATCTATAAAAGTATAAATACTAATCAGCAAGTTGATATTAGTCGTTTACTTTATCGGGATAGTAAGAAGAAGATAATATTAAAAGGCATATTAAAGCATAAAAAAGTAAAAACGGAATTAGCCAAACAGCCGATATTAATCAATAGCCCAACATTAACATCACTATCATTAGCCCCCCAATATCATTTTAATCTGACATCAGGTTATTTATCTATTAATCCATCAGCAGAAATTGGGTTGTCTTTTTTTGGGGCATCACCTGATTATATTGCTGAAAACTCACCCCGAAGCCACTATAGAAAATTGAGTCTAAATATACATTATCAATATTTATTTCCTTACTCTGTCTCCTATATTACGTCTTTTTATGGTCAATATACATCTGATAATCTTTATAGTGTGGAAAAAATATCCATAGATGGATTAAATGCAGTTCGTGGTGCTAAACAAAATAAGCTTAGTGCCAATAGAGGACTTTATTGGCGTAATGAAATTAATACACCATGGATAAATTCATTTTTAGGTCAATGGCGTTTTATTACAGCTGTTGATTATGGCGTTATCTATTCTGATCAATATGAAACAAAGCAGCAGTCTTTATTAGCTGGCGCTATGGGGCTTTCATTTTATCGTTCCCCTTTTTCTTCACAACTATTGATAAACAAACCATTCATTTATCCAAAGTGGTTAAATGCTAACCAATGGTCTTTATCTTGGTCAATTTCTTTCGCTCTTTAGATAAGGAAGTTTTTTATGCATAAAAAGGATATTTCGCGAAAACAGCGTTT