Homologs in group_362

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7 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_13005 FBDBKF_13005 77.9 Morganella morganii S1 fhaC Hemolysin activation/secretion protein
EHELCC_06320 EHELCC_06320 77.9 Morganella morganii S2 fhaC Hemolysin activation/secretion protein
NLDBIP_06640 NLDBIP_06640 77.9 Morganella morganii S4 fhaC Hemolysin activation/secretion protein
LHKJJB_03520 LHKJJB_03520 77.9 Morganella morganii S3 fhaC Hemolysin activation/secretion protein
HKOGLL_06995 HKOGLL_06995 77.9 Morganella morganii S5 fhaC Hemolysin activation/secretion protein
PMI_RS02920 PMI_RS02920 27.4 Proteus mirabilis HI4320 - ShlB/FhaC/HecB family hemolysin secretion/activation protein
PMI_RS10135 PMI_RS10135 46.0 Proteus mirabilis HI4320 hpmB hemolysin secretion/activation protein HpmB

Distribution of the homologs in the orthogroup group_362

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_362

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P16465 4.18e-170 497 48 3 510 3 hpmB Hemolysin transporter protein HpmB Proteus mirabilis
P15321 3.66e-163 479 48 3 526 1 shlB Hemolysin transporter protein ShlB Serratia marcescens
Q3YL97 1.45e-44 169 29 9 494 1 cdiB Outer membrane transporter CdiB Escherichia coli
Q0T962 4.25e-42 162 29 11 486 3 cdiB Outer membrane transporter CdiB Escherichia coli O6:K15:H31 (strain 536 / UPEC)
E0SDG9 5.12e-42 162 29 16 539 3 cdiB Outer membrane transporter CdiB Dickeya dadantii (strain 3937)
P0DMJ8 8.22e-32 133 26 9 416 3 cdiB2 Outer membrane transporter CdiB-2 Burkholderia pseudomallei (strain 1026b)
Q7CGD8 5.89e-30 127 25 7 435 3 cdib Outer membrane transporter CdiB Yersinia pestis
B0UUL1 9.89e-19 93 23 17 547 3 ibpB Outer membrane transporter protein IbpB Histophilus somni (strain 2336)
P35077 7.57e-12 71 24 12 433 1 fhaC Filamentous hemagglutinin transporter protein FhaC Bordetella pertussis (strain Tohama I / ATCC BAA-589 / NCTC 13251)

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS16190
Feature type CDS
Gene -
Product ShlB/FhaC/HecB family hemolysin secretion/activation protein
Location 45330 - 47039 (strand: -1)
Length 1710 (nucleotides) / 569 (amino acids)

Contig

Accession term accessions NZ_VXKB01000006 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 212134 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_362
Orthogroup size 8
N. genomes 7

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Genomic region

Domains

PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB
PF08479 POTRA domain, ShlB-type
PF17287 POTRA domain

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG2831 Intracellular trafficking, secretion, and vesicular transport (U) U Hemolysin activation/secretion protein

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K11017 hemolysin activation/secretion protein Bacterial secretion system -

Protein Sequence

MTKLPVLPILLCRIVCCIALPAIFLCRAAIAAPFPSVPDNPGVDASRRALQDTTHQVNDLLEQQAYQQLNKSHNTKPAAESVLQLAGNDHCLPVTGVYLSGITLLSQADLSSLSPLPAQCIRSRDINILVAELMERYLAKGYITARIRFLPVNTYQEIGIGVTEGIIERIDGADGGINTAMLFPSLTGKPLKITELEQGLDQANRLRSNHVTMDILPGKLPGGSVVHLNNQRGTPLSLSLTADNYGQKSTGRRQMRATASADSPAELSDFLSLSGATTTDDRKNRYSRSGMLFYSVPYGALTVSTYASMSGYRIDQALRYNRVILHGDSAQAALRADYAIFRNQTRIDSLMAQITYKRSRNYINDTLIGVSSPSLSIAEAGYTGLLMVPGGVISTTLSAEKGTTLFGADTRQTLPGSDPQYTKGKFSLNYIQGFSLSGDAYLLSSNLTGQYTQDNLPGVEWLTLSGSNAVRGFGDGSLSADKGGYWQNTLSRRFVRQGVALTPRAGVDYGRVMAQTGHAGWQSATGVSAGINFSYGGALLDAEISRARTTAAAMPAQDTLFSLRLGYQF

Flanking regions ( +/- flanking 50bp)

TTCTCTGCCCGGAACGGGCGGTGAATATCGTGCGGGATAAGTAAGCTGAATTGACTAAATTACCGGTATTACCGATATTGCTCTGCCGCATTGTCTGTTGCATAGCCTTGCCCGCGATATTTCTCTGTCGGGCAGCGATTGCCGCACCATTTCCTTCCGTGCCTGACAATCCGGGCGTTGATGCCTCGCGCCGGGCATTGCAGGACACCACGCACCAGGTAAATGACCTGCTGGAACAGCAGGCTTATCAGCAACTTAATAAATCTCATAATACCAAACCGGCGGCGGAATCTGTTCTGCAACTCGCCGGGAATGACCACTGTCTGCCGGTGACCGGTGTGTATCTTTCCGGGATTACGCTGTTATCACAGGCGGATCTCTCTTCGCTCTCTCCACTGCCTGCGCAGTGTATCCGCAGCCGGGATATCAATATCCTGGTTGCAGAGCTGATGGAGCGTTACCTGGCGAAAGGTTATATCACTGCGCGTATCCGGTTTTTGCCGGTCAATACGTACCAGGAAATCGGGATCGGCGTAACCGAGGGCATTATTGAGCGGATCGACGGCGCAGACGGCGGGATTAATACCGCGATGCTGTTTCCGTCACTGACCGGAAAACCGCTGAAAATAACCGAACTGGAGCAGGGGCTGGATCAGGCAAACCGCCTGCGATCCAATCATGTCACGATGGATATTCTTCCCGGAAAGCTGCCGGGCGGCTCGGTTGTGCATCTGAATAATCAGCGCGGCACACCTTTGTCCCTCTCTCTTACGGCTGATAACTACGGGCAGAAAAGTACCGGGCGGCGTCAGATGCGCGCCACAGCATCAGCAGACAGTCCGGCGGAGTTATCGGACTTTCTCAGCCTGAGTGGCGCAACCACGACAGATGACCGGAAAAACCGCTACAGCCGTTCCGGGATGCTGTTCTATTCCGTTCCGTACGGCGCGCTGACCGTCAGCACTTACGCCAGCATGTCCGGTTACCGGATAGACCAGGCTTTGCGTTATAACCGGGTCATTTTACACGGAGACAGCGCGCAGGCTGCGCTGCGGGCAGACTATGCCATTTTCCGCAACCAGACCCGGATTGATTCTCTGATGGCGCAAATCACATACAAACGCAGCCGCAATTATATAAACGACACACTGATTGGCGTCAGCAGCCCGTCCCTGAGCATCGCGGAAGCCGGTTACACCGGGCTGCTTATGGTGCCGGGCGGTGTTATCAGCACTACGCTTTCGGCGGAGAAAGGCACGACACTGTTTGGTGCCGATACCCGGCAAACCTTACCGGGGTCTGATCCGCAATATACCAAAGGTAAATTTTCGCTCAATTATATTCAGGGCTTTTCGTTGTCGGGTGATGCGTACCTGCTCAGCAGCAATCTGACCGGTCAGTACACTCAGGACAACCTTCCGGGTGTGGAGTGGCTGACACTGTCAGGCAGCAATGCTGTCAGGGGCTTTGGCGACGGCTCGTTATCGGCGGATAAAGGGGGGTACTGGCAAAACACCCTTTCCCGCCGTTTTGTCCGGCAGGGCGTCGCTTTGACGCCGCGTGCCGGTGTGGACTACGGACGGGTGATGGCTCAGACCGGACATGCGGGATGGCAATCTGCCACCGGGGTTTCTGCGGGCATCAATTTCAGTTACGGCGGAGCACTGCTGGATGCGGAAATCAGTCGTGCCCGTACAACTGCCGCGGCAATGCCTGCGCAGGATACGTTATTTTCCCTGCGTCTCGGATATCAGTTCTGATCACATTCGTCTGTTGTTGGATGGTAAGGAAATAATATGAAAAAAGAACG