COG2217


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG2217, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 15 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description Cation-transporting P-type ATPase
Function(s) descr. Inorganic ion transport and metabolism (P)

Occurence in the database

COG2217 is associated with 15 different proteins (see tab "Protein list" and "Profile")
The 15 proteins are classified into 2 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_771 FBDBKF_03555 114383 116788 1 cadA zinc/cadmium/mercury/lead-transporting ATPase Morganella morganii S1
1 group_363 FBDBKF_13015 107391 110129 1 copA copper-exporting P-type ATPase CopA Morganella morganii S1
2 group_363 EHELCC_06330 277423 280161 1 copA copper-exporting P-type ATPase CopA Morganella morganii S2
3 group_771 EHELCC_06980 130315 132720 -1 cadA zinc/cadmium/mercury/lead-transporting ATPase Morganella morganii S2
4 group_363 NLDBIP_06650 318488 321226 1 copA copper-exporting P-type ATPase CopA Morganella morganii S4
5 group_771 NLDBIP_07305 130188 132593 -1 cadA zinc/cadmium/mercury/lead-transporting ATPase Morganella morganii S4
6 group_363 LHKJJB_03530 296012 298750 1 copA copper-exporting P-type ATPase CopA Morganella morganii S3
7 group_771 LHKJJB_06840 93934 96339 -1 cadA zinc/cadmium/mercury/lead-transporting ATPase Morganella morganii S3
8 group_771 HKOGLL_04090 137048 139453 1 cadA zinc/cadmium/mercury/lead-transporting ATPase Morganella morganii S5
9 group_363 HKOGLL_07005 217876 220614 1 copA copper-exporting P-type ATPase CopA Morganella morganii S5
10 group_363 F4V73_RS04945 1051231 1053717 1 heavy metal translocating P-type ATPase Morganella psychrotolerans
11 group_771 F4V73_RS11345 410447 412846 -1 zinc/cadmium/mercury/lead-transporting ATPase Morganella psychrotolerans
12 group_363 F4V73_RS16200 47787 50531 1 copA copper-exporting P-type ATPase CopA Morganella psychrotolerans
13 group_363 PMI_RS10710 2353322 2356276 1 copA copper-exporting P-type ATPase CopA Proteus mirabilis HI4320
14 group_771 PMI_RS17915 3937417 3939759 -1 zinc/cadmium/mercury/lead-transporting ATPase Proteus mirabilis HI4320