COG2205
Help to interpret the results
Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG2205, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries
within the database. 17 occurences are identified.
The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction.
Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.
Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.
Description
Description | K+-sensing histidine kinase KdpD |
---|---|
Function(s) descr. | Signal transduction mechanisms (T) |
# | Orthogroup | Locus | Start | Stop | S. | Gene | Product | Organism |
---|---|---|---|---|---|---|---|---|
0 | group_536 | FBDBKF_01195 | 223095 | 224534 | -1 | baeS | Signal transduction histidine kinase | Morganella morganii S1 |
1 | group_761 | FBDBKF_03425 | 89117 | 91804 | -1 | kdpD | two-component system sensor histidine kinase KdpD | Morganella morganii S1 |
2 | group_536 | EHELCC_00350 | 84334 | 85773 | 1 | baeS | Signal transduction histidine kinase | Morganella morganii S2 |
3 | group_761 | EHELCC_07110 | 155299 | 157986 | 1 | kdpD | two-component system sensor histidine kinase KdpD | Morganella morganii S2 |
4 | group_536 | NLDBIP_03110 | 594363 | 595802 | -1 | baeS | Signal transduction histidine kinase | Morganella morganii S4 |
5 | group_761 | NLDBIP_07435 | 155172 | 157859 | 1 | kdpD | two-component system sensor histidine kinase KdpD | Morganella morganii S4 |
6 | group_536 | LHKJJB_04625 | 201604 | 203043 | -1 | baeS | Signal transduction histidine kinase | Morganella morganii S3 |
7 | group_761 | LHKJJB_06970 | 118918 | 121605 | 1 | kdpD | two-component system sensor histidine kinase KdpD | Morganella morganii S3 |
8 | group_536 | HKOGLL_02420 | 84539 | 85978 | 1 | baeS | Signal transduction histidine kinase | Morganella morganii S5 |
9 | group_761 | HKOGLL_03960 | 111782 | 114469 | -1 | kdpD | two-component system sensor histidine kinase KdpD | Morganella morganii S5 |
10 | group_432 | F4V73_RS06355 | 1320008 | 1322722 | 1 | rcsD | phosphotransferase RcsD | Morganella psychrotolerans |
11 | group_536 | F4V73_RS07265 | 1511877 | 1513316 | -1 | HAMP domain-containing sensor histidine kinase | Morganella psychrotolerans | |
12 | group_407 | F4V73_RS10185 | 147590 | 149086 | -1 | HAMP domain-containing sensor histidine kinase | Morganella psychrotolerans | |
13 | group_761 | F4V73_RS11475 | 438323 | 441010 | 1 | kdpD | two-component system sensor histidine kinase KdpD | Morganella psychrotolerans |
14 | group_761 | PMI_RS05920 | 1299462 | 1302164 | -1 | kdpD | two-component system sensor histidine kinase KdpD | Proteus mirabilis HI4320 |
15 | group_432 | PMI_RS08485 | 1845004 | 1847697 | 1 | rcsD | phosphotransferase RcsD | Proteus mirabilis HI4320 |
16 | group_536 | PMI_RS09250 | 2016236 | 2017684 | -1 | HAMP domain-containing sensor histidine kinase | Proteus mirabilis HI4320 |