Orthogroup:group_613


Homologs in group_613

Help

7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_01935 FBDBKF_01935 Morganella morganii S1 sirB1 invasion regulator SirB1
EHELCC_02405 EHELCC_02405 Morganella morganii S2 sirB1 invasion regulator SirB1
NLDBIP_01055 NLDBIP_01055 Morganella morganii S4 sirB1 invasion regulator SirB1
LHKJJB_00980 LHKJJB_00980 Morganella morganii S3 sirB1 invasion regulator SirB1
HKOGLL_01020 HKOGLL_01020 Morganella morganii S5 sirB1 invasion regulator SirB1
F4V73_RS04280 F4V73_RS04280 Morganella psychrotolerans sirB1 invasion regulator SirB1
PMI_RS05275 PMI_RS05275 Proteus mirabilis HI4320 sirB1 invasion regulator SirB1

Distribution of group_613 homologs

Help

Number of homologs in each genome (first column and blue bar chart)

Download SVG

Phylogeny of group_613 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_613

Orthogroup content: 7 members

Help

This page summarizes the annotation of all members of the orthologous group group_613.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 sirB1 7

Product

# Product Occurence
1 invasion regulator SirB1 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG2912 7 T Signal transduction mechanisms (T) Regulator of sirC expression, contains transglutaminase-like and TPR domains

Pfam domain Annotation(s)

Domain ID Occurences Description
PF13369 7 Transglutaminase-like superfamily
PF13371 7 Tetratricopeptide repeat

Annotations of the 16 SwissProt hits

Annotation Number of occurrences
F-box only protein 21 3
Protein SirB1 2
UPF0162 protein BU173 1
UPF0162 protein BUsg_167 1
UPF0162 protein HI_1558 1
UPF0162 protein PA3419 1
UPF0162 protein PD_0709 1
UPF0162 protein PM0557 1
UPF0162 protein VC_2176 1
UPF0162 protein XF_1494 1
UPF0162 protein YchA 2
UPF0162 protein bbp_163 1

Protein length

Min length 268
Max length 271
Mean length (sd) 268.4 (1.1)
Median length 268.0

Protein length distribution