Orthogroup:group_508



Homologs in group_508

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_01025 FBDBKF_01025 Morganella morganii S1 hemF oxygen-dependent coproporphyrinogen oxidase
EHELCC_00520 EHELCC_00520 Morganella morganii S2 hemF oxygen-dependent coproporphyrinogen oxidase
NLDBIP_02940 NLDBIP_02940 Morganella morganii S4 hemF oxygen-dependent coproporphyrinogen oxidase
LHKJJB_04455 LHKJJB_04455 Morganella morganii S3 hemF oxygen-dependent coproporphyrinogen oxidase
HKOGLL_02590 HKOGLL_02590 Morganella morganii S5 hemF oxygen-dependent coproporphyrinogen oxidase
F4V73_RS07100 F4V73_RS07100 Morganella psychrotolerans hemF oxygen-dependent coproporphyrinogen oxidase
PMI_RS09075 PMI_RS09075 Proteus mirabilis HI4320 hemF oxygen-dependent coproporphyrinogen oxidase

Distribution of group_508 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_508 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_508

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_508.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 hemF 7

Product

# Product Occurence
1 oxygen-dependent coproporphyrinogen oxidase 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0408 7 H Coenzyme transport and metabolism (H) Coproporphyrinogen-III oxidase HemH, oxygen-dependent

Kegg Ortholog Annotation(s)

Pfam domain Annotation(s)

Domain ID Occurences Description
PF01218 7 Coproporphyrinogen III oxidase

Annotations of the 240 SwissProt hits

Annotation Number of occurrences
Coproporphyrinogen-III oxidase 1, chloroplastic 1
Coproporphyrinogen-III oxidase 2, chloroplastic 1
Coproporphyrinogen-III oxidase, aerobic 1 1
Coproporphyrinogen-III oxidase, aerobic 2 1
Oxygen-dependent coproporphyrinogen-III oxidase 228
Oxygen-dependent coproporphyrinogen-III oxidase, chloroplastic 4
Oxygen-dependent coproporphyrinogen-III oxidase, mitochondrial 3
Probable oxygen-dependent coproporphyrinogen-III oxidase 1

Protein length

Min length 300
Max length 302
Mean length (sd) 300.6 (1.0)
Median length 300.0

Protein length distribution