COG0824


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG0824, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 15 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description Acyl-CoA thioesterase FadM
Function(s) descr. Lipid transport and metabolism (I)

Occurence in the database

COG0824 is associated with 15 different proteins (see tab "Protein list" and "Profile")
The 15 proteins are classified into 2 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_325 FBDBKF_09760 47694 48086 -1 ybgC tol-pal system-associated acyl-CoA thioesterase Morganella morganii S1
1 group_2117 FBDBKF_15905 32305 32715 1 fadM Acyl-CoA thioesterase FadM Morganella morganii S1
2 group_325 EHELCC_04560 239659 240051 -1 ybgC tol-pal system-associated acyl-CoA thioesterase Morganella morganii S2
3 group_2117 EHELCC_18505 19744 20154 1 fadM Acyl-CoA thioesterase FadM Morganella morganii S2
4 group_325 NLDBIP_04560 239455 239847 -1 ybgC tol-pal system-associated acyl-CoA thioesterase Morganella morganii S4
5 group_2117 NLDBIP_17340 19744 20154 1 fadM Acyl-CoA thioesterase FadM Morganella morganii S4
6 group_325 LHKJJB_14070 95531 95923 1 ybgC tol-pal system-associated acyl-CoA thioesterase Morganella morganii S3
7 group_2117 LHKJJB_17320 36034 36444 -1 fadM Acyl-CoA thioesterase FadM Morganella morganii S3
8 group_325 HKOGLL_12465 48475 48867 -1 ybgC tol-pal system-associated acyl-CoA thioesterase Morganella morganii S5
9 group_2117 HKOGLL_17075 19744 20154 1 fadM Acyl-CoA thioesterase FadM Morganella morganii S5
10 group_325 F4V73_RS00580 124528 124920 1 ybgC tol-pal system-associated acyl-CoA thioesterase Morganella psychrotolerans
11 group_325 F4V73_RS11980 550355 550777 1 thioesterase family protein Morganella psychrotolerans
12 group_2117 F4V73_RS16405 97866 98270 -1 thioesterase family protein Morganella psychrotolerans
13 group_2117 PMI_RS00585 151338 151745 1 thioesterase family protein Proteus mirabilis HI4320
14 group_325 PMI_RS02850 627801 628196 1 ybgC tol-pal system-associated acyl-CoA thioesterase Proteus mirabilis HI4320