Homologs in group_2154

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
EHELCC_18505 EHELCC_18505 100.0 Morganella morganii S2 fadM Acyl-CoA thioesterase FadM
NLDBIP_17340 NLDBIP_17340 100.0 Morganella morganii S4 fadM Acyl-CoA thioesterase FadM
LHKJJB_17320 LHKJJB_17320 100.0 Morganella morganii S3 fadM Acyl-CoA thioesterase FadM
HKOGLL_17075 HKOGLL_17075 100.0 Morganella morganii S5 fadM Acyl-CoA thioesterase FadM
F4V73_RS16405 F4V73_RS16405 92.5 Morganella psychrotolerans - thioesterase family protein
PMI_RS00585 PMI_RS00585 50.4 Proteus mirabilis HI4320 - thioesterase family protein

Distribution of the homologs in the orthogroup group_2154

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_2154

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P77712 8.27e-49 155 57 0 128 1 fadM Long-chain acyl-CoA thioesterase FadM Escherichia coli (strain K12)
S4TE15 2.19e-05 45 23 2 124 2 TE3 Acyl-acyl carrier protein thioesterase TE3, chloroplastic Humulus lupulus
F4HX80 2.95e-05 45 24 2 124 2 ALT4 Acyl-acyl carrier protein thioesterase ATL4, chloroplastic Arabidopsis thaliana
Q46HJ9 0.00023 42 27 3 124 3 PMN2A_1541 1,4-dihydroxy-2-naphthoyl-CoA hydrolase Prochlorococcus marinus (strain NATL2A)

  • Number of RefSeq hits:

General

Source Morganella morganii S1
Locus tag FBDBKF_15905
Feature type CDS
Gene fadM
Product Acyl-CoA thioesterase FadM
Location 32305 - 32715 (strand: 1)
Length 411 (nucleotides) / 136 (amino acids)
In genomic island -

Contig

Accession contig_22
Length 68748 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_2154
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF13279 Thioesterase-like superfamily

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG0824 Lipid transport and metabolism (I) I Acyl-CoA thioesterase FadM

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K12500 thioesterase III [EC:3.1.2.-] - -

Protein Sequence

MSTTIKVIGYHIDAFGHVNNARYLEFLEAARWDWLESYDAYRWFKQMDIAVVVVNININYRLPVYVGERLVIDSYLQHAGQKSGVLKQIITRQEDKQVVADAEVTFVFINMKTGKAIPIEGEIRDKFELLTAPKED

Flanking regions ( +/- flanking 50bp)

CGGGCTGACGGGGAAGGGAATACCGGAAACAGAGTAAAGGGAGAGATATTATGAGCACCACAATTAAAGTGATTGGCTACCATATTGATGCCTTCGGACATGTTAACAATGCGCGTTATCTGGAGTTTCTGGAGGCCGCCCGCTGGGACTGGCTGGAAAGCTACGATGCTTACCGCTGGTTCAAACAGATGGATATCGCCGTGGTGGTGGTGAATATCAATATTAACTACCGGCTGCCGGTGTATGTGGGAGAGCGGCTGGTGATAGACAGCTATTTACAGCACGCGGGGCAGAAAAGCGGTGTTCTCAAACAGATCATTACCCGTCAGGAAGATAAGCAGGTTGTGGCGGATGCGGAAGTGACCTTTGTCTTTATTAATATGAAAACCGGTAAAGCGATCCCGATTGAAGGGGAGATCCGCGATAAATTTGAGTTGCTGACGGCACCGAAAGAGGACTGATCACCATCAGGACAGAAAAGCGCCCGGCGGGTTGCCGGGCGTAACAGACA