Homologs in group_2154

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_15905 FBDBKF_15905 50.4 Morganella morganii S1 fadM Acyl-CoA thioesterase FadM
EHELCC_18505 EHELCC_18505 50.4 Morganella morganii S2 fadM Acyl-CoA thioesterase FadM
NLDBIP_17340 NLDBIP_17340 50.4 Morganella morganii S4 fadM Acyl-CoA thioesterase FadM
LHKJJB_17320 LHKJJB_17320 50.4 Morganella morganii S3 fadM Acyl-CoA thioesterase FadM
HKOGLL_17075 HKOGLL_17075 50.4 Morganella morganii S5 fadM Acyl-CoA thioesterase FadM
F4V73_RS16405 F4V73_RS16405 52.2 Morganella psychrotolerans - thioesterase family protein

Distribution of the homologs in the orthogroup group_2154

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_2154

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P77712 1.96e-46 149 55 0 128 1 fadM Long-chain acyl-CoA thioesterase FadM Escherichia coli (strain K12)
P44679 2.13e-07 50 25 2 132 1 ybgC Acyl-CoA thioesterase YbgC Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
F4HX80 2.02e-06 48 23 3 131 2 ALT4 Acyl-acyl carrier protein thioesterase ATL4, chloroplastic Arabidopsis thaliana
P0A8Z6 2e-05 44 31 3 111 3 ybgC Acyl-CoA thioester hydrolase YbgC Shigella flexneri
P0A8Z3 2e-05 44 31 3 111 1 ybgC Acyl-CoA thioester hydrolase YbgC Escherichia coli (strain K12)
P0A8Z4 2e-05 44 31 3 111 3 ybgC Acyl-CoA thioester hydrolase YbgC Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P0A8Z5 2e-05 44 31 3 111 3 ybgC Acyl-CoA thioester hydrolase YbgC Escherichia coli O157:H7

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS00585
Feature type CDS
Gene -
Product thioesterase family protein
Location 151338 - 151745 (strand: 1)
Length 408 (nucleotides) / 135 (amino acids)
In genomic island -

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_2154
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF13279 Thioesterase-like superfamily

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG0824 Lipid transport and metabolism (I) I Acyl-CoA thioesterase FadM

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K12500 thioesterase III [EC:3.1.2.-] - -

Protein Sequence

MSTLIKVYGFHLDVFEHVNNARYLEFLEQARWDWIEQHLDLAWFKRHGLALVVANININYRLPANLGDELIISCDIAEVGIKSGVLSQKIVRKQDGALISDALVTFVLVDINTKKALTLTDQLREKLEYVRQSAD

Flanking regions ( +/- flanking 50bp)

ATTTCTCTTAGCTAAAGTTTGTTAGGGATATCAAGAGGTAATAAAGTCATATGAGTACATTAATTAAAGTTTATGGATTCCATTTAGATGTTTTTGAGCATGTGAATAATGCACGTTACCTTGAATTTTTAGAACAAGCGAGATGGGATTGGATTGAACAACACTTAGATCTCGCTTGGTTTAAACGGCATGGTCTAGCACTCGTTGTCGCGAATATTAATATCAACTATCGTTTGCCTGCTAATTTAGGCGATGAACTAATCATTAGTTGTGATATTGCAGAAGTCGGTATTAAAAGTGGCGTGTTGTCTCAAAAAATAGTGAGAAAACAAGATGGTGCATTGATTTCAGATGCATTAGTGACTTTTGTACTCGTTGATATCAATACTAAAAAAGCATTAACACTTACAGATCAGTTACGAGAAAAATTGGAGTATGTACGCCAGTCTGCTGATTAGCATTGATGTTATCCGGTCAACCGTCTAATTTTATCGGTACTCGTAACATA