Orthogroup:group_2034



Homologs in group_2034

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_15240 FBDBKF_15240 Morganella morganii S1 alaS alanine--tRNA ligase
EHELCC_11005 EHELCC_11005 Morganella morganii S2 alaS alanine--tRNA ligase
NLDBIP_11350 NLDBIP_11350 Morganella morganii S4 alaS alanine--tRNA ligase
LHKJJB_11210 LHKJJB_11210 Morganella morganii S3 alaS alanine--tRNA ligase
HKOGLL_09820 HKOGLL_09820 Morganella morganii S5 alaS alanine--tRNA ligase
F4V73_RS12205 F4V73_RS12205 Morganella psychrotolerans alaS alanine--tRNA ligase
PMI_RS01800 PMI_RS01800 Proteus mirabilis HI4320 alaS alanine--tRNA ligase

Distribution of group_2034 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_2034 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_2034

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_2034.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 alaS 7

Product

# Product Occurence
1 alanine--tRNA ligase 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0013 7 J Translation, ribosomal structure and biogenesis (J) Alanyl-tRNA synthetase

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K01872 7 alanyl-tRNA synthetase [EC:6.1.1.7] Aminoacyl-tRNA biosynthesis -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF01411 7 tRNA synthetases class II (A)
PF02272 7 DHHA1 domain
PF07973 7 Threonyl and Alanyl tRNA synthetase second additional domain

Annotations of the 518 SwissProt hits

Annotation Number of occurrences
Alanine--tRNA ligase 513
Alanine--tRNA ligase 1 1
Alanine--tRNA ligase, chloroplastic/mitochondrial 4

Protein length

Unique protein length 875

Protein length distribution