COG0561
Help to interpret the results
Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG0561, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries
within the database. 27 occurences are identified.
The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction.
Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.
Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.
Description
Description | Hydroxymethylpyrimidine pyrophosphatase and other HAD family phosphatases |
---|---|
Function(s) descr. | Coenzyme transport and metabolism (H) General function prediction only (R) |
Occurence in the database
COG0561 is associated with 27 different proteins (see tab "Protein list" and "Profile") |
The 27 proteins are classified into 4 different orthogroup(s) |
# | Orthogroup | Locus | Start | Stop | S. | Gene | Product | Organism |
---|---|---|---|---|---|---|---|---|
0 | group_1355 | FBDBKF_08395 | 55438 | 56241 | 1 | yigL | sugar/pyridoxal phosphate phosphatase YigL | Morganella morganii S1 |
1 | group_1493 | FBDBKF_09635 | 26353 | 27174 | 1 | cof | pyridoxal phosphatase | Morganella morganii S1 |
2 | group_2920 | FBDBKF_13785 | 51012 | 51821 | 1 | cof | Hydroxymethylpyrimidine pyrophosphatase and other HAD family phosphatases | Morganella morganii S1 |
3 | group_2179 | FBDBKF_16405 | 5913 | 6719 | -1 | yidA | sugar-phosphatase | Morganella morganii S1 |
4 | group_1493 | EHELCC_04435 | 218318 | 219139 | 1 | cof | pyridoxal phosphatase | Morganella morganii S2 |
5 | group_2179 | EHELCC_08270 | 122899 | 123705 | -1 | yidA | sugar-phosphatase | Morganella morganii S2 |
6 | group_2920 | EHELCC_11455 | 135888 | 136697 | 1 | cof | Hydroxymethylpyrimidine pyrophosphatase and other HAD family phosphatases | Morganella morganii S2 |
7 | group_1355 | EHELCC_13130 | 107484 | 108287 | -1 | yigL | sugar/pyridoxal phosphate phosphatase YigL | Morganella morganii S2 |
8 | group_1493 | NLDBIP_04435 | 218114 | 218935 | 1 | cof | pyridoxal phosphatase | Morganella morganii S4 |
9 | group_2179 | NLDBIP_08595 | 122899 | 123705 | -1 | yidA | sugar-phosphatase | Morganella morganii S4 |
10 | group_2920 | NLDBIP_11800 | 135888 | 136697 | 1 | cof | Hydroxymethylpyrimidine pyrophosphatase and other HAD family phosphatases | Morganella morganii S4 |
11 | group_1355 | NLDBIP_13470 | 107484 | 108287 | -1 | yigL | sugar/pyridoxal phosphate phosphatase YigL | Morganella morganii S4 |
12 | group_2179 | LHKJJB_05670 | 133454 | 134260 | 1 | yidA | sugar-phosphatase | Morganella morganii S3 |
13 | group_2920 | LHKJJB_11660 | 135888 | 136697 | 1 | cof | Hydroxymethylpyrimidine pyrophosphatase and other HAD family phosphatases | Morganella morganii S3 |
14 | group_1355 | LHKJJB_13085 | 54156 | 54959 | 1 | yigL | sugar/pyridoxal phosphate phosphatase YigL | Morganella morganii S3 |
15 | group_1493 | LHKJJB_14195 | 116443 | 117264 | -1 | cof | pyridoxal phosphatase | Morganella morganii S3 |
16 | group_2179 | HKOGLL_05245 | 107490 | 108296 | -1 | yidA | sugar-phosphatase | Morganella morganii S5 |
17 | group_2920 | HKOGLL_10270 | 135888 | 136697 | 1 | cof | Hydroxymethylpyrimidine pyrophosphatase and other HAD family phosphatases | Morganella morganii S5 |
18 | group_1355 | HKOGLL_11945 | 107484 | 108287 | -1 | yigL | sugar/pyridoxal phosphate phosphatase YigL | Morganella morganii S5 |
19 | group_1493 | HKOGLL_12340 | 27134 | 27955 | 1 | cof | pyridoxal phosphatase | Morganella morganii S5 |
20 | group_1493 | F4V73_RS00705 | 146402 | 147223 | -1 | pyridoxal phosphatase | Morganella psychrotolerans | |
21 | group_2179 | F4V73_RS02925 | 621094 | 621900 | -1 | yidA | sugar-phosphatase | Morganella psychrotolerans |
22 | group_1355 | F4V73_RS09595 | 20182 | 20988 | 1 | yigL | sugar/pyridoxal phosphate phosphatase YigL | Morganella psychrotolerans |
23 | group_2920 | F4V73_RS12655 | 129280 | 130098 | 1 | Cof-type HAD-IIB family hydrolase | Morganella psychrotolerans | |
24 | group_1493 | PMI_RS02955 | 651677 | 652498 | -1 | pyridoxal phosphatase | Proteus mirabilis HI4320 | |
25 | group_2179 | PMI_RS07800 | 1707504 | 1708310 | 1 | yidA | sugar-phosphatase | Proteus mirabilis HI4320 |
26 | group_1355 | PMI_RS16650 | 3670106 | 3670906 | 1 | yigL | sugar/pyridoxal phosphate phosphatase YigL | Proteus mirabilis HI4320 |