Orthogroup:group_1540


Homologs in group_1540

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_09985 FBDBKF_09985 Morganella morganii S1 corC CNNM family magnesium/cobalt transport protein CorC
EHELCC_04785 EHELCC_04785 Morganella morganii S2 corC CNNM family magnesium/cobalt transport protein CorC
NLDBIP_04785 NLDBIP_04785 Morganella morganii S4 corC CNNM family magnesium/cobalt transport protein CorC
LHKJJB_13845 LHKJJB_13845 Morganella morganii S3 corC CNNM family magnesium/cobalt transport protein CorC
HKOGLL_12690 HKOGLL_12690 Morganella morganii S5 corC CNNM family magnesium/cobalt transport protein CorC
F4V73_RS00360 F4V73_RS00360 Morganella psychrotolerans corC CNNM family magnesium/cobalt transport protein CorC
PMI_RS02190 PMI_RS02190 Proteus mirabilis HI4320 corC CNNM family magnesium/cobalt transport protein CorC

Distribution of group_1540 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_1540 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_1540

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_1540.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 corC 7

Product

# Product Occurence
1 CNNM family magnesium/cobalt transport protein CorC 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG4535 7 P Inorganic ion transport and metabolism (P) Mg2+ and Co2+ transporter CorC, contains CBS pair and CorC-HlyC domains

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K06189 7 hemolysin (HlyC) family protein - -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00571 7 CBS domain
PF03471 7 Transporter associated domain
PF21917 7 N-terminal region of NMB0537

Annotations of the 81 SwissProt hits

Annotation Number of occurrences
DUF21 domain-containing protein At1g47330 1
DUF21 domain-containing protein At1g55930, chloroplastic 1
DUF21 domain-containing protein At2g14520 1
DUF21 domain-containing protein At4g14230 1
DUF21 domain-containing protein At4g14240 1
DUF21 domain-containing protein At4g33700 1
DUF21 domain-containing protein At5g52790 1
Hemolysin C 4
Hemolysin C homolog 3
Magnesium and cobalt efflux protein CorC 12
Metal transporter CNNM1 2
Metal transporter CNNM2 3
Metal transporter CNNM3 2
Metal transporter CNNM4 4
Metal transporter cnnm-1 1
Metal transporter cnnm-2 1
Metal transporter cnnm-3 1
Metal transporter cnnm-5 1
Polyamine export protein 5
Possible hemolysin C 4
Protein MAM3 1
Putative DUF21 domain-containing protein At1g03270 1
Putative DUF21 domain-containing protein At3g13070, chloroplastic 1
UPF0053 inner membrane protein YfjD 1
UPF0053 inner membrane protein YoaE 3
UPF0053 protein BU323 1
UPF0053 protein BUsg_314 1
UPF0053 protein HI_0107 1
UPF0053 protein MG146 1
UPF0053 protein MG146 homolog 1
UPF0053 protein MT1890 1
UPF0053 protein MT2435 1
UPF0053 protein Mb2387c 1
UPF0053 protein Rv1842c 1
UPF0053 protein Rv2366c 1
UPF0053 protein YegH 2
UPF0053 protein YhdP 1
UPF0053 protein YhdT 1
UPF0053 protein YqhB 1
UPF0053 protein YrkA 1
UPF0053 protein YugS 1
UPF0053 protein bbp_300 1
UPF0053 protein in cps region (Fragment) 1
UPF0053 protein sll0260 1
UPF0053 protein sll1254 1
Uncharacterized protein MT1889 1
Uncharacterized protein Rv1841c 1
Unextended protein 1

Protein length

Min length 293
Max length 296
Mean length (sd) 295.6 (1.1)
Median length 296.0

Protein length distribution