Orthogroup:group_1411


Homologs in group_1411

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_08720 FBDBKF_08720 Morganella morganii S1 lytS Sensor histidine kinase, LytS/YehU family
EHELCC_12805 EHELCC_12805 Morganella morganii S2 lytS Sensor histidine kinase, LytS/YehU family
NLDBIP_13145 NLDBIP_13145 Morganella morganii S4 lytS Sensor histidine kinase, LytS/YehU family
LHKJJB_13410 LHKJJB_13410 Morganella morganii S3 lytS Sensor histidine kinase, LytS/YehU family
HKOGLL_11620 HKOGLL_11620 Morganella morganii S5 lytS Sensor histidine kinase, LytS/YehU family
F4V73_RS09940 F4V73_RS09940 Morganella psychrotolerans - sensor histidine kinase
PMI_RS17100 PMI_RS17100 Proteus mirabilis HI4320 - sensor histidine kinase

Distribution of group_1411 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_1411 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_1411

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_1411.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 lytS 5
2 - 2

Product

# Product Occurence
1 Sensor histidine kinase, LytS/YehU family 5
2 sensor histidine kinase 2

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG3275 7 T Signal transduction mechanisms (T) Sensor histidine kinase, LytS/YehU family

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K02478 7 two-component system, LytTR family, sensor kinase [EC:2.7.13.3] - -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF06580 7 Histidine kinase
PF07694 7 5TMR of 5TMR-LYT
PF13185 1 GAF domain

Annotations of the 39 SwissProt hits

Annotation Number of occurrences
Putative uncharacterized protein YwpD 1
Sensor histidine kinase BtsS 3
Sensor histidine kinase YesM 1
Sensor histidine kinase YpdA 2
Sensor histidine kinase/phosphatase LytS 9
Sensor protein LytS 12
Sensor protein kinase HptS 9
Uncharacterized sensor-like histidine kinase SERP2405 1
Uncharacterized sensor-like histidine kinase SE_0166 1

Protein length

Min length 567
Max length 569
Mean length (sd) 568.7 (0.8)
Median length 569.0

Protein length distribution