COG0471


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG0471, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 21 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description Di- and tricarboxylate antiporter
Function(s) descr. Carbohydrate transport and metabolism (G)

Occurence in the database

COG0471 is associated with 21 different proteins (see tab "Protein list" and "Profile")
The 21 proteins are classified into 3 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_1869 FBDBKF_13965 86530 87915 -1 citT Di- and tricarboxylate antiporter Morganella morganii S1
1 group_1902 FBDBKF_14185 33908 35737 -1 citT Di- and tricarboxylate antiporter Morganella morganii S1
2 group_2344 FBDBKF_18925 1383 2855 1 citT Di- and tricarboxylate antiporter Morganella morganii S1
3 group_1902 EHELCC_08095 81248 83077 1 citT Di- and tricarboxylate antiporter Morganella morganii S2
4 group_1869 EHELCC_11635 171406 172791 -1 citT Di- and tricarboxylate antiporter Morganella morganii S2
5 group_2344 EHELCC_18670 1383 2855 1 citT Di- and tricarboxylate antiporter Morganella morganii S2
6 group_1902 NLDBIP_08420 81248 83077 1 citT Di- and tricarboxylate antiporter Morganella morganii S4
7 group_1869 NLDBIP_11980 171406 172791 -1 citT Di- and tricarboxylate antiporter Morganella morganii S4
8 group_2344 NLDBIP_18635 22658 24130 -1 citT Di- and tricarboxylate antiporter Morganella morganii S4
9 group_1902 LHKJJB_05845 174082 175911 -1 citT Di- and tricarboxylate antiporter Morganella morganii S3
10 group_1869 LHKJJB_11840 171406 172791 -1 citT Di- and tricarboxylate antiporter Morganella morganii S3
11 group_2344 LHKJJB_18540 1383 2855 1 citT Di- and tricarboxylate antiporter Morganella morganii S3
12 group_1902 HKOGLL_05070 65839 67668 1 citT Di- and tricarboxylate antiporter Morganella morganii S5
13 group_1869 HKOGLL_10450 171406 172791 -1 citT Di- and tricarboxylate antiporter Morganella morganii S5
14 group_2344 HKOGLL_18275 1383 2855 1 citT Di- and tricarboxylate antiporter Morganella morganii S5
15 group_1902 F4V73_RS02745 578109 579938 1 SLC13 family permease Morganella psychrotolerans
16 group_1869 F4V73_RS12820 163823 165208 -1 DASS family sodium-coupled anion symporter Morganella psychrotolerans
17 group_2344 F4V73_RS13830 400244 401716 1 DASS family sodium-coupled anion symporter Morganella psychrotolerans
18 group_1869 PMI_RS01070 264470 265852 1 DASS family sodium-coupled anion symporter Proteus mirabilis HI4320
19 group_1902 PMI_RS08665 1893195 1895024 -1 SLC13 family permease Proteus mirabilis HI4320
20 group_2344 PMI_RS10870 2395514 2396986 1 anion permease Proteus mirabilis HI4320