Orthogroup:group_1940


Homologs in group_1940

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_14185 FBDBKF_14185 Morganella morganii S1 citT Di- and tricarboxylate antiporter
EHELCC_08095 EHELCC_08095 Morganella morganii S2 citT Di- and tricarboxylate antiporter
NLDBIP_08420 NLDBIP_08420 Morganella morganii S4 citT Di- and tricarboxylate antiporter
LHKJJB_05845 LHKJJB_05845 Morganella morganii S3 citT Di- and tricarboxylate antiporter
HKOGLL_05070 HKOGLL_05070 Morganella morganii S5 citT Di- and tricarboxylate antiporter
F4V73_RS02745 F4V73_RS02745 Morganella psychrotolerans - SLC13 family permease
PMI_RS08665 PMI_RS08665 Proteus mirabilis HI4320 - SLC13 family permease

Distribution of group_1940 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_1940 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_1940

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_1940.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 citT 5
2 - 2

Product

# Product Occurence
1 Di- and tricarboxylate antiporter 5
2 SLC13 family permease 2

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0471 7 G Carbohydrate transport and metabolism (G) Di- and tricarboxylate antiporter

Pfam domain Annotation(s)

Domain ID Occurences Description
PF02080 7 TrkA-C domain
PF03600 7 Citrate transporter

Annotations of the 46 SwissProt hits

Annotation Number of occurrences
46 kDa membrane protein 1
Dicarboxylate transporter 1, chloroplastic 2
Inorganic phosphate transporter PHO87 1
Na(+)/citrate cotransporter 3
Na(+)/dicarboxylate cotransporter 3 3
Probable sodium/sulfate cotransporter 3 1
Putative malate transporter YflS 1
Putative sulfur deprivation response regulator 1
Putative transporter arsB 1
Sodium-dependent dicarboxylate transporter SdcS 10
Sodium-dependent high-affinity dicarboxylate transporter 2 1
Sodium-dependent high-affinity dicarboxylate transporter 3 1
Sodium-dependent low-affinity dicarboxylate transporter 1 1
Sodium/sulfate cotransporter 1 1
Sodium/sulfate cotransporter 2 1
Solute carrier family 13 member 2 4
Solute carrier family 13 member 4 1
Tonoplast dicarboxylate transporter 1
Uncharacterized transporter B0285.6 1
Uncharacterized transporter HI_0608 1
Uncharacterized transporter MJ0672 1
Uncharacterized transporter MT2758 1
Uncharacterized transporter MT2759 1
Uncharacterized transporter Mb2703 1
Uncharacterized transporter Rv2684 1
Uncharacterized transporter Rv2685 1
Uncharacterized transporter YfbS 2
Uncharacterized transporter sll0640 1

Protein length

Unique protein length 609

Protein length distribution