Orthogroup:group_2378


Homologs in group_2378

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_19140 FBDBKF_19140 Morganella morganii S1 rpmJ 50S ribosomal protein L36
EHELCC_18885 EHELCC_18885 Morganella morganii S2 rpmJ 50S ribosomal protein L36
NLDBIP_18900 NLDBIP_18900 Morganella morganii S4 rpmJ 50S ribosomal protein L36
LHKJJB_18755 LHKJJB_18755 Morganella morganii S3 rpmJ 50S ribosomal protein L36
HKOGLL_18490 HKOGLL_18490 Morganella morganii S5 rpmJ 50S ribosomal protein L36
F4V73_RS19025 F4V73_RS19025 Morganella psychrotolerans rpmJ 50S ribosomal protein L36
PMI_RS19140 PMI_RS19140 Proteus mirabilis HI4320 rpmJ 50S ribosomal protein L36

Distribution of group_2378 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_2378 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_2378

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_2378.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 rpmJ 7

Product

# Product Occurence
1 50S ribosomal protein L36 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0257 7 J Translation, ribosomal structure and biogenesis (J) Ribosomal protein L36

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K02919 7 large subunit ribosomal protein L36 Ribosome -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00444 7 Ribosomal protein L36

Annotations of the 515 SwissProt hits

Annotation Number of occurrences
Large ribosomal subunit protein bL36 444
Large ribosomal subunit protein bL36A 34
Large ribosomal subunit protein bL36B 8
Large ribosomal subunit protein bL36c 29

Protein length

Unique protein length 38

Protein length distribution