Homologs in group_2344

Help

6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_18925 FBDBKF_18925 100.0 Morganella morganii S1 citT Di- and tricarboxylate antiporter
EHELCC_18670 EHELCC_18670 100.0 Morganella morganii S2 citT Di- and tricarboxylate antiporter
NLDBIP_18635 NLDBIP_18635 100.0 Morganella morganii S4 citT Di- and tricarboxylate antiporter
LHKJJB_18540 LHKJJB_18540 100.0 Morganella morganii S3 citT Di- and tricarboxylate antiporter
F4V73_RS13830 F4V73_RS13830 90.4 Morganella psychrotolerans - DASS family sodium-coupled anion symporter
PMI_RS10870 PMI_RS10870 82.2 Proteus mirabilis HI4320 - anion permease

Distribution of the homologs in the orthogroup group_2344

Help

Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

Download SVG

Phylogeny of the RefSeq best hits of group_2344

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
O34726 3.28e-154 450 48 5 488 2 yflS Putative malate transporter YflS Bacillus subtilis (strain 168)
Q41364 2.69e-134 402 44 4 480 1 DIT1 Dicarboxylate transporter 1, chloroplastic Spinacia oleracea
Q9LXV3 2.33e-130 392 43 4 480 1 DIT1 Dicarboxylate transporter 1, chloroplastic Arabidopsis thaliana
Q9FMF7 8.21e-117 357 40 3 483 1 DIT2-1 Dicarboxylate transporter 2.1, chloroplastic Arabidopsis thaliana
Q8L7Z9 1.02e-107 334 38 4 483 1 DIT2 Dicarboxylate transporter 2, chloroplastic Spinacia oleracea
Q9FMF8 5.55e-99 311 37 4 483 2 DIT2-2 Dicarboxylate transporter 2.2, chloroplastic Arabidopsis thaliana
P75763 6.99e-89 283 36 9 491 1 ybhI Inner membrane protein YbhI Escherichia coli (strain K12)
Q57048 6.56e-85 273 36 9 480 3 HI_0020 Uncharacterized transporter HI_0020 Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
P0AE74 1.68e-77 253 32 10 492 3 citT Citrate/succinate antiporter Escherichia coli (strain K12)
P0AE75 1.68e-77 253 32 10 492 3 citT Citrate/succinate antiporter Escherichia coli O157:H7
Q8XBK4 1.63e-76 251 33 8 471 3 ttdT L-tartrate/succinate antiporter Escherichia coli O157:H7
Q3YXI0 1.75e-76 251 33 8 471 3 ttdT L-tartrate/succinate antiporter Shigella sonnei (strain Ss046)
P39414 3.81e-76 250 33 8 471 1 ttdT L-tartrate/succinate antiporter Escherichia coli (strain K12)
Q83JJ9 5.29e-76 249 33 8 471 3 ttdT L-tartrate/succinate antiporter Shigella flexneri
Q0TD43 5.95e-76 249 33 8 471 3 ttdT L-tartrate/succinate antiporter Escherichia coli O6:K15:H31 (strain 536 / UPEC)
Q31WX1 1.38e-75 248 33 8 471 3 ttdT L-tartrate/succinate antiporter Shigella boydii serotype 4 (strain Sb227)
Q32BQ4 2.6e-75 248 33 8 471 3 ttdT L-tartrate/succinate antiporter Shigella dysenteriae serotype 1 (strain Sd197)
Q1R6R8 1.17e-74 246 33 8 471 3 ttdT L-tartrate/succinate antiporter Escherichia coli (strain UTI89 / UPEC)
Q8FDG7 1.17e-74 246 33 8 471 3 ttdT L-tartrate/succinate antiporter Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
Q07252 1.82e-16 85 26 14 390 3 H16_A0667 Membrane protein Cupriavidus necator (strain ATCC 17699 / DSM 428 / KCTC 22496 / NCIMB 10442 / H16 / Stanier 337)
Q49YW0 4.3e-10 65 22 12 454 3 sdcS Sodium-dependent dicarboxylate transporter SdcS Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229 / NCIMB 8711 / NCTC 7292 / S-41)
Q8NVS5 2.03e-05 50 21 14 448 3 sdcS Sodium-dependent dicarboxylate transporter SdcS Staphylococcus aureus (strain MW2)
Q6G816 2.03e-05 50 21 14 448 3 sdcS Sodium-dependent dicarboxylate transporter SdcS Staphylococcus aureus (strain MSSA476)
Q2YU56 2.14e-05 50 21 11 332 3 sdcS Sodium-dependent dicarboxylate transporter SdcS Staphylococcus aureus (strain bovine RF122 / ET3-1)
Q7A4P8 2.42e-05 50 23 7 250 1 sdcS Sodium-dependent dicarboxylate transporter SdcS Staphylococcus aureus (strain N315)
Q99SX1 2.42e-05 50 23 7 250 1 sdcS Sodium-dependent dicarboxylate transporter SdcS Staphylococcus aureus (strain Mu50 / ATCC 700699)
Q5HEK4 2.42e-05 50 23 7 250 3 sdcS Sodium-dependent dicarboxylate transporter SdcS Staphylococcus aureus (strain COL)
Q2FWY4 2.42e-05 50 23 7 250 3 sdcS Sodium-dependent dicarboxylate transporter SdcS Staphylococcus aureus (strain NCTC 8325 / PS 47)
Q6GFE0 2.69e-05 50 23 7 250 3 sdcS Sodium-dependent dicarboxylate transporter SdcS Staphylococcus aureus (strain MRSA252)
Q2FFH9 4.34e-05 49 23 7 250 3 sdcS Sodium-dependent dicarboxylate transporter SdcS Staphylococcus aureus (strain USA300)
Q9UKG4 7.36e-05 48 24 12 260 1 SLC13A4 Solute carrier family 13 member 4 Homo sapiens
Q57486 0.000705 45 25 10 263 3 HI_0608 Uncharacterized transporter HI_0608 Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)

  • Number of RefSeq hits:

General

Source Morganella morganii S5
Locus tag HKOGLL_18275
Feature type CDS
Gene citT
Product Di- and tricarboxylate antiporter
Location 1383 - 2855 (strand: 1)
Length 1473 (nucleotides) / 490 (amino acids)

Contig

Accession ZDB_705
Length 25512 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_2344
Orthogroup size 7
N. genomes 7

Actions

Genomic region

Domains

PF00939 Sodium:sulfate symporter transmembrane region

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG0471 Carbohydrate transport and metabolism (G) G Di- and tricarboxylate antiporter

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K03319 divalent anion:Na+ symporter, DASS family - -

Protein Sequence

MNKLTPLKPVPSLIAVLITCIIWFAVPVPDGVDPNAWHLLALFVGTIAAIIGKAMPIGAVSMVAIALVALTGVTNPGSAKAALADALSGFSNELIWLIGVSIMVSLSLNKTGLGARIGYYFISLFGKKTLGIAYSLAIAETVLAPVTPSNTARGGGIIHPIMRSIADSFGSKADDGTSGKIGRYLALVNYNTNPITSAMFITATAPNPLIVTLIVQEAGKGAELSWSMWAVAAFLPALISLITMPLVIYFLYKPEITATPDAPEFARERIRELGPVSLPEKITLGVFILLLALWAGVPGWLFGSQYNVNPTTAAFIGLAALLCSGVLSWDDVLKNKGAWDTVVWFAALVMMASFLGKLGLIKWVSLTVGGGIDHLGIGWTGGMLLLVLFYVYSHYFFASTTAHITAMFAAFYAAGLALGAPPMLLGLTLAFSSSLMMSLTHYGTGTAPIIFGSGYTTLGEWWKTGLVMSIVNLVIWIIAGSLWWKLLGYW

Flanking regions ( +/- flanking 50bp)

ATAAATACGTCACCCTCCGGCAGTTAAATACAATTACCACGGACGGATCTATGAATAAACTGACTCCGCTGAAACCTGTTCCTTCCTTAATCGCTGTTCTTATTACCTGTATTATCTGGTTTGCTGTTCCGGTACCCGATGGCGTTGATCCTAATGCCTGGCATCTGCTCGCACTTTTTGTCGGTACAATTGCCGCGATTATCGGTAAAGCGATGCCTATCGGTGCCGTTTCCATGGTGGCGATTGCCCTTGTCGCCCTGACCGGCGTGACTAATCCCGGCTCCGCGAAAGCTGCGCTCGCTGATGCCCTGAGCGGCTTTTCCAATGAGCTTATCTGGCTTATCGGGGTCTCTATTATGGTCTCCCTCAGCCTGAATAAAACCGGGCTCGGGGCACGTATCGGGTACTATTTTATTTCCCTGTTCGGCAAGAAAACGCTGGGTATCGCTTATTCCCTGGCGATCGCCGAAACCGTACTGGCACCGGTCACTCCCAGTAATACTGCGCGCGGCGGCGGGATCATCCACCCGATTATGCGCTCTATCGCTGACAGTTTCGGTTCAAAAGCCGATGACGGCACCAGCGGAAAAATCGGCCGCTATCTGGCGCTGGTGAATTACAATACCAACCCTATCACGTCCGCCATGTTTATTACCGCCACCGCACCTAACCCGCTGATTGTCACCCTGATTGTACAAGAGGCCGGTAAAGGAGCAGAGCTGAGCTGGTCGATGTGGGCTGTGGCCGCATTTTTACCGGCGCTGATCTCACTGATCACCATGCCGCTGGTGATCTATTTTCTGTATAAACCGGAGATCACCGCCACCCCGGATGCCCCGGAGTTTGCCCGTGAGCGGATCCGCGAACTCGGCCCGGTGTCTCTGCCGGAAAAAATCACACTCGGGGTCTTTATCCTGCTGCTGGCACTGTGGGCCGGTGTCCCCGGCTGGCTGTTCGGCAGTCAATATAATGTGAACCCGACCACCGCCGCCTTTATCGGCCTTGCCGCCCTGTTGTGCAGCGGTGTGCTGAGCTGGGATGATGTGCTGAAAAACAAAGGGGCGTGGGATACCGTGGTCTGGTTCGCCGCACTGGTGATGATGGCATCATTCCTCGGCAAACTCGGGCTGATAAAGTGGGTCTCGCTGACGGTCGGCGGCGGTATTGACCATCTCGGGATCGGCTGGACCGGCGGGATGCTGCTGCTGGTGCTGTTTTATGTCTATTCCCACTACTTTTTTGCCAGCACCACTGCGCATATCACCGCCATGTTCGCGGCGTTTTATGCCGCCGGACTGGCACTCGGCGCACCGCCGATGCTGCTCGGGCTGACCCTGGCGTTTTCCTCCTCGCTGATGATGTCACTGACTCATTACGGCACCGGCACCGCCCCGATTATTTTCGGTTCGGGTTACACCACCCTAGGTGAGTGGTGGAAAACCGGTCTGGTGATGAGCATCGTTAACCTGGTTATCTGGATTATCGCCGGCAGCCTGTGGTGGAAACTCCTCGGATACTGGTAACAGATTGACCGGCATCATCTTCCTGAGGGTATTCTTTGCCGAATTAAGAA