Orthogroup:group_1907


Homologs in group_1907

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_13965 FBDBKF_13965 Morganella morganii S1 citT Di- and tricarboxylate antiporter
EHELCC_11635 EHELCC_11635 Morganella morganii S2 citT Di- and tricarboxylate antiporter
NLDBIP_11980 NLDBIP_11980 Morganella morganii S4 citT Di- and tricarboxylate antiporter
LHKJJB_11840 LHKJJB_11840 Morganella morganii S3 citT Di- and tricarboxylate antiporter
HKOGLL_10450 HKOGLL_10450 Morganella morganii S5 citT Di- and tricarboxylate antiporter
F4V73_RS12820 F4V73_RS12820 Morganella psychrotolerans - DASS family sodium-coupled anion symporter
PMI_RS01070 PMI_RS01070 Proteus mirabilis HI4320 - DASS family sodium-coupled anion symporter

Distribution of group_1907 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_1907 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_1907

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_1907.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 citT 5
2 - 2

Product

# Product Occurence
1 Di- and tricarboxylate antiporter 5
2 DASS family sodium-coupled anion symporter 2

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0471 7 G Carbohydrate transport and metabolism (G) Di- and tricarboxylate antiporter

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K14445 7 solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2/3/5 - -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00939 1 Sodium:sulfate symporter transmembrane region
PF03600 6 Citrate transporter

Annotations of the 68 SwissProt hits

Annotation Number of occurrences
Citrate/succinate antiporter 2
Dicarboxylate transporter 2.2, chloroplastic 1
Inner membrane protein YbhI 1
Inorganic phosphate transporter PHO87 1
L-tartrate/succinate antiporter 9
Low-affinity phosphate transporter PHO90 1
Low-affinity phosphate transporter PHO91 1
Magnetosome protein MamN 1
Membrane protein 1
Na(+)/citrate cotransporter 3
Na(+)/dicarboxylate cotransporter 3 3
P protein 3
Probable sodium/sulfate cotransporter 3 1
Protein I'm not dead yet 1
Protein I'm not dead yet 2 1
Sodium-dependent dicarboxylate transporter SdcS 10
Sodium-dependent high-affinity dicarboxylate transporter 2 1
Sodium-dependent high-affinity dicarboxylate transporter 3 1
Sodium-dependent low-affinity dicarboxylate transporter 1 1
Sodium/sulfate cotransporter 1 1
Sodium/sulfate cotransporter 2 1
Solute carrier family 13 member 1 3
Solute carrier family 13 member 2 4
Solute carrier family 13 member 4 1
Tonoplast dicarboxylate transporter 1
Uncharacterized transporter B0285.6 1
Uncharacterized transporter C3B8.04c 1
Uncharacterized transporter HI_0020 1
Uncharacterized transporter HI_0608 1
Uncharacterized transporter MJ0672 1
Uncharacterized transporter MT2758 1
Uncharacterized transporter MT2759 1
Uncharacterized transporter Mb2703 1
Uncharacterized transporter Rv2684 1
Uncharacterized transporter Rv2685 1
Uncharacterized transporter YfbS 2
Uncharacterized transporter sll0640 1
Uncharacterized transporter slr0753 1

Protein length

Min length 460
Max length 461
Mean length (sd) 460.9 (0.4)
Median length 461.0

Protein length distribution