Homologs in group_1902

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_14185 FBDBKF_14185 81.0 Morganella morganii S1 citT Di- and tricarboxylate antiporter
EHELCC_08095 EHELCC_08095 81.0 Morganella morganii S2 citT Di- and tricarboxylate antiporter
NLDBIP_08420 NLDBIP_08420 81.0 Morganella morganii S4 citT Di- and tricarboxylate antiporter
LHKJJB_05845 LHKJJB_05845 81.0 Morganella morganii S3 citT Di- and tricarboxylate antiporter
HKOGLL_05070 HKOGLL_05070 81.0 Morganella morganii S5 citT Di- and tricarboxylate antiporter
F4V73_RS02745 F4V73_RS02745 81.6 Morganella psychrotolerans - SLC13 family permease

Distribution of the homologs in the orthogroup group_1902

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_1902

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P0AFU2 0.0 877 71 1 610 3 yfbS Uncharacterized transporter YfbS Escherichia coli (strain K12)
P0AFU3 0.0 877 71 1 610 3 yfbS Uncharacterized transporter YfbS Escherichia coli O157:H7
P72958 3.99e-66 230 27 12 613 3 sll0640 Uncharacterized transporter sll0640 Synechocystis sp. (strain ATCC 27184 / PCC 6803 / Kazusa)
Q39593 4.21e-30 128 26 20 605 2 SAC1 Putative sulfur deprivation response regulator Chlamydomonas reinhardtii
D2K6F1 1.64e-24 112 26 5 288 2 SLT2 Sodium/sulfate cotransporter 2 Chlamydomonas reinhardtii
D2K6F1 1.05e-15 84 23 12 403 2 SLT2 Sodium/sulfate cotransporter 2 Chlamydomonas reinhardtii
A8IHV3 2.15e-24 112 27 6 293 2 SLT3 Probable sodium/sulfate cotransporter 3 Chlamydomonas reinhardtii
A8IHV3 1.41e-21 103 25 11 368 2 SLT3 Probable sodium/sulfate cotransporter 3 Chlamydomonas reinhardtii
A8IJF8 4.13e-20 98 25 5 288 2 SLT1 Sodium/sulfate cotransporter 1 Chlamydomonas reinhardtii
A8IJF8 5.58e-16 85 24 11 369 2 SLT1 Sodium/sulfate cotransporter 1 Chlamydomonas reinhardtii
Q57486 1.21e-09 64 28 2 151 3 HI_0608 Uncharacterized transporter HI_0608 Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
Q57486 4.42e-05 50 29 2 162 3 HI_0608 Uncharacterized transporter HI_0608 Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
Q57486 7.38e-05 49 31 4 137 3 HI_0608 Uncharacterized transporter HI_0608 Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
Q28615 1.13e-07 58 29 2 138 1 SLC13A2 Solute carrier family 13 member 2 Oryctolagus cuniculus
P0A607 4.03e-07 56 26 7 241 3 BQ2027_MB2703 Uncharacterized transporter Mb2703 Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97)
P0A607 5.26e-05 49 28 3 150 3 BQ2027_MB2703 Uncharacterized transporter Mb2703 Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97)
P9WPD9 4.03e-07 56 26 7 241 3 Rv2684 Uncharacterized transporter Rv2684 Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
P9WPD9 5.26e-05 49 28 3 150 3 Rv2684 Uncharacterized transporter Rv2684 Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
P9WPD8 4.36e-07 56 26 7 241 3 MT2758 Uncharacterized transporter MT2758 Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh)
P9WPD8 5.5e-05 49 28 3 150 3 MT2758 Uncharacterized transporter MT2758 Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh)
Q54GU0 5.55e-07 56 25 2 168 2 arsB Putative transporter arsB Dictyostelium discoideum
P46556 1.18e-06 55 25 0 145 3 B0285.6 Uncharacterized transporter B0285.6 Caenorhabditis elegans
P9WPD7 1.69e-06 54 27 4 185 1 Rv2685 Uncharacterized transporter Rv2685 Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
P9WPD7 8.86e-05 48 26 7 217 1 Rv2685 Uncharacterized transporter Rv2685 Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
P9WPD6 1.69e-06 54 27 4 185 3 MT2759 Uncharacterized transporter MT2759 Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh)
P9WPD6 8.86e-05 48 26 7 217 3 MT2759 Uncharacterized transporter MT2759 Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh)
Q58086 2.35e-06 53 24 3 155 3 MJ0672 Uncharacterized transporter MJ0672 Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
Q8WWT9 2.59e-06 54 27 3 136 1 SLC13A3 Na(+)/dicarboxylate cotransporter 3 Homo sapiens
Q8WWT9 2.69e-05 50 28 2 121 1 SLC13A3 Na(+)/dicarboxylate cotransporter 3 Homo sapiens
Q13183 2.95e-06 53 27 1 144 1 SLC13A2 Solute carrier family 13 member 2 Homo sapiens
Q6GFE0 3.09e-06 53 24 2 176 3 sdcS Sodium-dependent dicarboxylate transporter SdcS Staphylococcus aureus (strain MRSA252)
Q2YU56 3.22e-06 53 24 2 178 3 sdcS Sodium-dependent dicarboxylate transporter SdcS Staphylococcus aureus (strain bovine RF122 / ET3-1)
P46838 3.4e-06 53 27 5 190 3 ag45 46 kDa membrane protein Mycobacterium leprae (strain TN)
P46838 0.000287 47 28 3 171 3 ag45 46 kDa membrane protein Mycobacterium leprae (strain TN)
Q86YT5 3.43e-06 53 27 1 140 1 SLC13A5 Na(+)/citrate cotransporter Homo sapiens
Q7A4P8 3.49e-06 53 24 2 176 1 sdcS Sodium-dependent dicarboxylate transporter SdcS Staphylococcus aureus (strain N315)
Q99SX1 3.49e-06 53 24 2 176 1 sdcS Sodium-dependent dicarboxylate transporter SdcS Staphylococcus aureus (strain Mu50 / ATCC 700699)
Q5HEK4 3.49e-06 53 24 2 176 3 sdcS Sodium-dependent dicarboxylate transporter SdcS Staphylococcus aureus (strain COL)
Q2FWY4 3.49e-06 53 24 2 176 3 sdcS Sodium-dependent dicarboxylate transporter SdcS Staphylococcus aureus (strain NCTC 8325 / PS 47)
Q2FFH9 3.64e-06 53 24 2 176 3 sdcS Sodium-dependent dicarboxylate transporter SdcS Staphylococcus aureus (strain USA300)
Q8NVS5 5.1e-06 53 24 2 176 3 sdcS Sodium-dependent dicarboxylate transporter SdcS Staphylococcus aureus (strain MW2)
Q6G816 5.1e-06 53 24 2 176 3 sdcS Sodium-dependent dicarboxylate transporter SdcS Staphylococcus aureus (strain MSSA476)
Q8LG88 5.22e-06 53 28 3 148 2 TDT Tonoplast dicarboxylate transporter Arabidopsis thaliana
Q67BT3 9.22e-06 52 28 2 148 1 Slc13a5 Na(+)/citrate cotransporter Mus musculus
Q9Z0Z5 9.36e-06 52 27 3 136 1 Slc13a3 Na(+)/dicarboxylate cotransporter 3 Rattus norvegicus
Q9Z0Z5 9.69e-05 49 28 2 121 1 Slc13a3 Na(+)/dicarboxylate cotransporter 3 Rattus norvegicus
Q91Y63 1.28e-05 52 27 3 136 1 Slc13a3 Na(+)/dicarboxylate cotransporter 3 Mus musculus
Q91Y63 1.77e-05 51 28 2 121 1 Slc13a3 Na(+)/dicarboxylate cotransporter 3 Mus musculus
P70545 1.82e-05 51 31 1 132 1 Slc13a2 Solute carrier family 13 member 2 Rattus norvegicus
Q49YW0 3.11e-05 50 23 2 170 3 sdcS Sodium-dependent dicarboxylate transporter SdcS Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229 / NCIMB 8711 / NCTC 7292 / S-41)
Q49YW0 3.87e-05 50 27 2 136 3 sdcS Sodium-dependent dicarboxylate transporter SdcS Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229 / NCIMB 8711 / NCTC 7292 / S-41)
P32739 3.86e-05 50 25 1 147 2 nac-2 Sodium-dependent high-affinity dicarboxylate transporter 2 Caenorhabditis elegans
Q8CJ44 5.23e-05 50 26 2 148 1 Slc13a5 Na(+)/citrate cotransporter Rattus norvegicus
Q9UKG4 6.31e-05 49 22 1 144 1 SLC13A4 Solute carrier family 13 member 4 Homo sapiens
Q9ES88 7.66e-05 49 29 1 132 1 Slc13a2 Solute carrier family 13 member 2 Mus musculus
Q9LXV3 0.000454 47 32 1 120 1 DIT1 Dicarboxylate transporter 1, chloroplastic Arabidopsis thaliana
Q21339 0.000692 46 28 2 135 2 nac-3 Sodium-dependent high-affinity dicarboxylate transporter 3 Caenorhabditis elegans
Q41364 0.00073 46 31 1 120 1 DIT1 Dicarboxylate transporter 1, chloroplastic Spinacia oleracea

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS08665
Feature type CDS
Gene -
Product SLC13 family permease
Location 1893195 - 1895024 (strand: -1)
Length 1830 (nucleotides) / 609 (amino acids)

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_1902
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF02080 TrkA-C domain
PF03600 Citrate transporter

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG0471 Carbohydrate transport and metabolism (G) G Di- and tricarboxylate antiporter

Protein Sequence

MNSELLWVLSLLLIAIVLFTTNKIRMDVVALLVIVAFVLSGTLSLNEATVGFSDPNVLLIAALFVIGEGLVRTGVAYQMGDWLVRVAGSSEVKMLVLLMICVASLGAFMSSTGVVAIFIPVVLSVAARMKTSPSRLMMPLGFAGLISGLMTLVATPPNMVVNSELVREGLPSFQFFSITPIGIAVLVAGVLYMLVVRRWLGSSEGGKQKEVYRRTFRDLIRDYQLAGRARRLAIRKGSPLIGHSLDELHLRSRYGANVVGIERWRRFRRVMVSATGGTELRERDVLLVDMSASEVDLREFCREQMLEPMVLRGEYFSEQSRDVGLAEVSMNPDSELLGKSLREIKFRTRYGLNVVAIRREGSALPGKIVDEPLRLGDVLLVIGDWKLIRILSTKPRNFIVLNLAAEIDTVAPASSQAPHALFSLALMVALMVTNEVPNFIAALIACLLMGKFRCIDMESAYRSIHWPSIILIVGMMPFAAALQKTGGIELIVNGLMDVAGNAGPQVMLVCLFVLCATIGLFISNTATAVLMAPIAIAAAHQMNVSPLPFAMVIGVAASAAFMTPVSSPVNTLILEPGGYKFADFIKIGVPFTIIVMLISVFLIPLLFPF

Flanking regions ( +/- flanking 50bp)

AGTGAATTGACGTATTAATCTGTTTTCACTTATTGCTGATCGAGGCCATTTTGAATAGCGAATTATTATGGGTTTTAAGCCTGCTATTGATAGCTATTGTCCTTTTTACGACCAACAAAATCCGCATGGATGTGGTCGCTTTACTTGTCATCGTCGCTTTTGTTCTTAGCGGCACACTCTCATTAAATGAAGCCACGGTAGGATTTAGCGATCCGAACGTATTACTGATTGCGGCCCTTTTTGTTATTGGGGAAGGATTAGTAAGAACAGGTGTGGCATATCAAATGGGAGATTGGCTAGTACGAGTTGCGGGTAGTAGTGAAGTAAAAATGCTGGTGCTATTAATGATCTGTGTTGCAAGTTTAGGGGCTTTTATGAGCTCGACAGGGGTGGTGGCTATTTTTATTCCTGTGGTGCTCAGTGTGGCGGCACGGATGAAAACTTCTCCCAGTCGATTAATGATGCCTCTTGGCTTTGCGGGGTTAATTAGTGGTTTAATGACCCTAGTTGCGACACCGCCTAATATGGTGGTTAATAGTGAATTAGTTAGGGAAGGGCTACCCAGTTTTCAGTTTTTCTCTATTACCCCAATAGGGATCGCTGTATTAGTTGCGGGTGTGTTATATATGCTGGTGGTACGTCGTTGGTTAGGTTCAAGTGAAGGGGGTAAGCAAAAAGAGGTTTATCGTCGTACTTTTCGTGATCTTATCCGTGATTACCAATTAGCAGGGCGTGCACGTCGCTTAGCCATACGTAAAGGTTCACCACTGATTGGTCACTCTCTAGATGAATTACATTTACGCTCTCGCTATGGAGCAAACGTTGTCGGTATTGAACGCTGGAGGCGTTTTCGGCGTGTTATGGTCAGTGCGACAGGAGGCACTGAATTAAGAGAGCGAGATGTCCTATTAGTGGATATGTCAGCAAGTGAGGTAGATTTACGAGAGTTCTGTCGTGAACAAATGTTAGAGCCGATGGTGTTACGTGGAGAGTATTTTTCTGAGCAATCTCGTGATGTGGGATTAGCAGAAGTCTCTATGAACCCTGACTCAGAATTATTAGGAAAATCATTAAGAGAAATCAAATTCCGTACACGTTATGGGCTAAACGTTGTGGCTATTCGCCGTGAAGGGAGTGCTTTACCGGGGAAAATTGTTGATGAGCCATTACGTCTGGGAGATGTGTTACTGGTTATTGGTGATTGGAAATTAATTCGTATACTTTCGACAAAACCGCGTAATTTTATTGTATTAAATTTAGCGGCTGAAATTGATACTGTTGCACCGGCCTCATCGCAAGCACCACATGCACTTTTTTCATTAGCATTAATGGTTGCATTAATGGTGACCAATGAAGTACCTAACTTTATTGCCGCGTTAATTGCTTGCTTATTGATGGGAAAATTTCGCTGTATAGATATGGAAAGTGCTTATCGTTCTATTCATTGGCCAAGTATTATCTTGATTGTCGGGATGATGCCTTTTGCGGCTGCATTGCAAAAAACTGGGGGCATCGAGCTTATCGTTAATGGACTTATGGATGTAGCAGGGAATGCAGGGCCACAGGTTATGTTAGTCTGTTTATTTGTACTTTGTGCCACTATTGGTTTATTTATCTCTAATACGGCAACGGCGGTGTTAATGGCACCGATTGCAATAGCAGCAGCTCATCAAATGAATGTCTCTCCGTTACCTTTTGCAATGGTTATTGGTGTTGCTGCATCGGCGGCGTTTATGACACCTGTATCATCCCCGGTTAATACCCTGATCCTTGAGCCTGGTGGTTATAAATTTGCTGATTTTATTAAAATAGGGGTGCCTTTTACCATCATTGTGATGTTGATTAGCGTTTTCTTAATACCGCTATTATTCCCATTTTAATCGGTTATCTTTTGCAAAAACGCCGTTTAGTTTCATTTATTATAAACGGC