COG0316


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG0316, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 21 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description Fe-S cluster assembly iron-binding protein IscA
Function(s) descr. Posttranslational modification, protein turnover, chaperones (O)

Occurence in the database

COG0316 is associated with 21 different proteins (see tab "Protein list" and "Profile")
The 21 proteins are classified into 3 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_524 FBDBKF_01125 209908 210231 -1 iscA iron-sulfur cluster assembly protein IscA Morganella morganii S1
1 group_1034 FBDBKF_05830 168938 169318 -1 sufA Fe-S cluster assembly scaffold SufA Morganella morganii S1
2 group_1315 FBDBKF_08100 158800 159144 1 erpA iron-sulfur cluster insertion protein ErpA Morganella morganii S1
3 group_524 EHELCC_00420 98637 98960 1 iscA iron-sulfur cluster assembly protein IscA Morganella morganii S2
4 group_1034 EHELCC_11760 12176 12556 1 sufA Fe-S cluster assembly scaffold SufA Morganella morganii S2
5 group_1315 EHELCC_13930 132994 133338 1 erpA iron-sulfur cluster insertion protein ErpA Morganella morganii S2
6 group_524 NLDBIP_03040 581176 581499 -1 iscA iron-sulfur cluster assembly protein IscA Morganella morganii S4
7 group_1034 NLDBIP_12100 12131 12511 1 sufA Fe-S cluster assembly scaffold SufA Morganella morganii S4
8 group_1315 NLDBIP_14375 153869 154213 1 erpA iron-sulfur cluster insertion protein ErpA Morganella morganii S4
9 group_524 LHKJJB_04555 188417 188740 -1 iscA iron-sulfur cluster assembly protein IscA Morganella morganii S3
10 group_1315 LHKJJB_08475 5536 5880 -1 erpA iron-sulfur cluster insertion protein ErpA Morganella morganii S3
11 group_1034 LHKJJB_11960 12176 12556 1 sufA Fe-S cluster assembly scaffold SufA Morganella morganii S3
12 group_524 HKOGLL_02490 98842 99165 1 iscA iron-sulfur cluster assembly protein IscA Morganella morganii S5
13 group_1315 HKOGLL_08025 5536 5880 -1 erpA iron-sulfur cluster insertion protein ErpA Morganella morganii S5
14 group_1034 HKOGLL_10575 12176 12556 1 sufA Fe-S cluster assembly scaffold SufA Morganella morganii S5
15 group_1034 F4V73_RS03495 748140 748520 1 sufA Fe-S cluster assembly scaffold SufA Morganella psychrotolerans
16 group_524 F4V73_RS07195 1497896 1498219 -1 iscA iron-sulfur cluster assembly protein IscA Morganella psychrotolerans
17 group_1315 F4V73_RS12900 186790 187134 -1 erpA iron-sulfur cluster insertion protein ErpA Morganella psychrotolerans
18 group_1315 PMI_RS00990 244074 244418 1 erpA iron-sulfur cluster insertion protein ErpA Proteus mirabilis HI4320
19 group_1034 PMI_RS06850 1495403 1495771 -1 sufA Fe-S cluster assembly scaffold SufA Proteus mirabilis HI4320
20 group_524 PMI_RS09170 2000016 2000339 -1 iscA iron-sulfur cluster assembly protein IscA Proteus mirabilis HI4320