COG0316
Help to interpret the results
Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG0316, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries
within the database. 21 occurences are identified.
The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction.
Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.
Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.
Description
Description |
Fe-S cluster assembly iron-binding protein IscA |
Function(s) descr. |
Posttranslational modification, protein turnover, chaperones (O) |
Occurence in the database
COG0316 is associated with 21 different proteins (see tab "Protein list" and "Profile") |
The 21 proteins are classified into 3 different orthogroup(s)
|
# |
Orthogroup |
Locus |
Start |
Stop |
S. |
Gene |
Product |
Organism |
0 |
group_524 |
FBDBKF_01125 |
209908 |
210231 |
-1 |
iscA |
iron-sulfur cluster assembly protein IscA |
Morganella morganii S1 |
1 |
group_1034 |
FBDBKF_05830 |
168938 |
169318 |
-1 |
sufA |
Fe-S cluster assembly scaffold SufA |
Morganella morganii S1 |
2 |
group_1315 |
FBDBKF_08100 |
158800 |
159144 |
1 |
erpA |
iron-sulfur cluster insertion protein ErpA |
Morganella morganii S1 |
3 |
group_524 |
EHELCC_00420 |
98637 |
98960 |
1 |
iscA |
iron-sulfur cluster assembly protein IscA |
Morganella morganii S2 |
4 |
group_1034 |
EHELCC_11760 |
12176 |
12556 |
1 |
sufA |
Fe-S cluster assembly scaffold SufA |
Morganella morganii S2 |
5 |
group_1315 |
EHELCC_13930 |
132994 |
133338 |
1 |
erpA |
iron-sulfur cluster insertion protein ErpA |
Morganella morganii S2 |
6 |
group_524 |
NLDBIP_03040 |
581176 |
581499 |
-1 |
iscA |
iron-sulfur cluster assembly protein IscA |
Morganella morganii S4 |
7 |
group_1034 |
NLDBIP_12100 |
12131 |
12511 |
1 |
sufA |
Fe-S cluster assembly scaffold SufA |
Morganella morganii S4 |
8 |
group_1315 |
NLDBIP_14375 |
153869 |
154213 |
1 |
erpA |
iron-sulfur cluster insertion protein ErpA |
Morganella morganii S4 |
9 |
group_524 |
LHKJJB_04555 |
188417 |
188740 |
-1 |
iscA |
iron-sulfur cluster assembly protein IscA |
Morganella morganii S3 |
10 |
group_1315 |
LHKJJB_08475 |
5536 |
5880 |
-1 |
erpA |
iron-sulfur cluster insertion protein ErpA |
Morganella morganii S3 |
11 |
group_1034 |
LHKJJB_11960 |
12176 |
12556 |
1 |
sufA |
Fe-S cluster assembly scaffold SufA |
Morganella morganii S3 |
12 |
group_524 |
HKOGLL_02490 |
98842 |
99165 |
1 |
iscA |
iron-sulfur cluster assembly protein IscA |
Morganella morganii S5 |
13 |
group_1315 |
HKOGLL_08025 |
5536 |
5880 |
-1 |
erpA |
iron-sulfur cluster insertion protein ErpA |
Morganella morganii S5 |
14 |
group_1034 |
HKOGLL_10575 |
12176 |
12556 |
1 |
sufA |
Fe-S cluster assembly scaffold SufA |
Morganella morganii S5 |
15 |
group_1034 |
F4V73_RS03495 |
748140 |
748520 |
1 |
sufA |
Fe-S cluster assembly scaffold SufA |
Morganella psychrotolerans |
16 |
group_524 |
F4V73_RS07195 |
1497896 |
1498219 |
-1 |
iscA |
iron-sulfur cluster assembly protein IscA |
Morganella psychrotolerans |
17 |
group_1315 |
F4V73_RS12900 |
186790 |
187134 |
-1 |
erpA |
iron-sulfur cluster insertion protein ErpA |
Morganella psychrotolerans |
18 |
group_1315 |
PMI_RS00990 |
244074 |
244418 |
1 |
erpA |
iron-sulfur cluster insertion protein ErpA |
Proteus mirabilis HI4320 |
19 |
group_1034 |
PMI_RS06850 |
1495403 |
1495771 |
-1 |
sufA |
Fe-S cluster assembly scaffold SufA |
Proteus mirabilis HI4320 |
20 |
group_524 |
PMI_RS09170 |
2000016 |
2000339 |
-1 |
iscA |
iron-sulfur cluster assembly protein IscA |
Proteus mirabilis HI4320 |