Orthogroup:group_962


Homologs in group_962

Help

7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_05290 FBDBKF_05290 Morganella morganii S1 oppB oligopeptide ABC transporter permease OppB
EHELCC_12300 EHELCC_12300 Morganella morganii S2 oppB oligopeptide ABC transporter permease OppB
NLDBIP_12640 NLDBIP_12640 Morganella morganii S4 oppB oligopeptide ABC transporter permease OppB
LHKJJB_12500 LHKJJB_12500 Morganella morganii S3 oppB oligopeptide ABC transporter permease OppB
HKOGLL_11115 HKOGLL_11115 Morganella morganii S5 oppB oligopeptide ABC transporter permease OppB
F4V73_RS05745 F4V73_RS05745 Morganella psychrotolerans oppB oligopeptide ABC transporter permease OppB
PMI_RS07135 PMI_RS07135 Proteus mirabilis HI4320 oppB oligopeptide ABC transporter permease OppB

Distribution of group_962 homologs

Help

Number of homologs in each genome (first column and blue bar chart)

Download SVG

Phylogeny of group_962 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_962

Orthogroup content: 7 members

Help

This page summarizes the annotation of all members of the orthologous group group_962.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 oppB 7

Product

# Product Occurence
1 oligopeptide ABC transporter permease OppB 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0601 7 EP Amino acid transport and metabolism (E)
Inorganic ion transport and metabolism (P)		 ABC-type dipeptide/oligopeptide/nickel transport system, permease component

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K15581 7 oligopeptide transport system permease protein beta-Lactam resistance
ABC transporters
Quorum sensing		 -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00528 7 Binding-protein-dependent transport system inner membrane component
PF19300 7 Binding-prot-dependent transport system membrane comp, N-term

Annotations of the 75 SwissProt hits

Annotation Number of occurrences
Di/tripeptide transport system permease protein DppB 1
Dipeptide transport system permease protein DppB 7
Dipeptide transport system permease protein DppC 1
Glutathione transport system permease protein GsiC 16
Inner membrane ABC transporter permease protein YejB 2
Metal-staphylopine import system permease protein CntB 2
Nickel import system permease protein NikB 9
Nickel transport system permease protein NikB 1
Oligopeptide transport system permease protein AmiC 2
Oligopeptide transport system permease protein AppB 1
Oligopeptide transport system permease protein OppB 11
Peptide transport system permease protein SapB 4
Peptidoglycan transport system permease protein YejB 1
Probable D,D-dipeptide transport system permease protein DdpB 1
Probable peptide ABC transporter permease protein y4tP 1
Putative peptide permease protein BMEII0860 1
Putative peptide permease protein BOV_A0351 1
Putative peptide permease protein BRA0408/BS1330_II0405 1
Putative peptide transport permease protein MT1320 1
Putative peptide transport permease protein Mb1314c 1
Putative peptide transport permease protein Rv1283c 1
Putative peptide transport system permease protein BAB2_1050 1
Putative peptide transport system permease protein BAB2_1051 1
Putative peptide transport system permease protein BMEII0207/BMEII0208 1
Putative peptide transport system permease protein BMEII0209 1
Putative peptide transport system permease protein BRA1092/BS1330_II1084 1
Putative peptide transport system permease protein BRA1093/BS1330_II1085 1
Putative peptide transport system permease protein BruAb2_1031 1
Putative peptide transport system permease protein BruAb2_1032 1
Putrescine export system permease protein SapB 1

Protein length

Unique protein length 306

Protein length distribution