Orthogroup:group_77


Homologs in group_77

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13 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_20045 FBDBKF_20045 Morganella morganii S1 sfmF fimbria assembly protein
EHELCC_03485 EHELCC_03485 Morganella morganii S2 sfmF fimbria assembly protein
NLDBIP_03485 NLDBIP_03485 Morganella morganii S4 sfmF fimbria assembly protein
LHKJJB_09315 LHKJJB_09315 Morganella morganii S3 sfmF fimbria assembly protein
HKOGLL_09660 HKOGLL_09660 Morganella morganii S5 sfmF fimbria assembly protein
F4V73_RS00870 F4V73_RS00870 Morganella psychrotolerans - fimbrial protein
F4V73_RS01055 F4V73_RS01055 Morganella psychrotolerans - fimbrial protein
F4V73_RS01060 F4V73_RS01060 Morganella psychrotolerans - fimbrial protein
F4V73_RS01665 F4V73_RS01665 Morganella psychrotolerans sfmF fimbria assembly protein
F4V73_RS09370 F4V73_RS09370 Morganella psychrotolerans - fimbrial protein
F4V73_RS09385 F4V73_RS09385 Morganella psychrotolerans - fimbrial protein
F4V73_RS10910 F4V73_RS10910 Morganella psychrotolerans - fimbrial protein
F4V73_RS12590 F4V73_RS12590 Morganella psychrotolerans - fimbrial protein

Distribution of group_77 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_77 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_77

Orthogroup content: 13 members

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This page summarizes the annotation of all members of the orthologous group group_77.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 sfmF 6
2 - 7

Product

# Product Occurence
1 fimbria assembly protein 6
2 fimbrial protein 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG3539 13 N Cell motility (N) Pilin (type 1 fimbrial protein)

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K07345 3 major type 1 subunit fimbrin (pilin) Shigellosis
Pertussis		 -
K07348 6 minor fimbrial subunit - -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00419 13 Fimbrial protein

Annotations of the 53 SwissProt hits

Annotation Number of occurrences
F17 fimbrial protein 1
Fimbria A protein 1
Fimbrial protein 987P 1
Fimbrial protein FimX 1
Fimbrial subunit ElfA 1
Fimbrial subunit type 1 3
Fimbrial subunit type 3 1
Fimbrial-like protein FimF 1
Fimbrin-like protein FimI 2
Laminin-binding fimbrial subunit ElfA 1
Long polar fimbria protein A 1
Major MR/P fimbria protein 1
Major fimbrial subunit 5
Major fimbrial subunit SMF-1 1
Minor fimbrial subunit HifD 2
Probable fimbrial subunit LpfE 1
Probable major fimbrial subunit LpfA 1
Protein FimA 1
Protein FimF 1
Protein FimG 1
Protein LpfE 1
Protein MrkF 1
Putative fimbrin-like protein FimI 1
Putative minor fimbrial subunit PmfF 1
S-fimbrial adhesin protein SfaS 1
S-fimbrial protein subunit SfaA 1
S-fimbrial protein subunit SfaG 1
Serotype 2 fimbrial subunit 1
Serotype 3 fimbrial subunit 1
Type-1 fimbrial protein subunit 1
Type-1 fimbrial protein, A chain 4
Type-1 fimbrial protein, C chain 2
Uncharacterized fimbrial-like protein SfmA 2
Uncharacterized fimbrial-like protein SfmF 1
Uncharacterized fimbrial-like protein YcbU 1
Uncharacterized fimbrial-like protein YcbV 1
Uncharacterized fimbrial-like protein YdeR 1
Uncharacterized fimbrial-like protein YdeS 1
Uncharacterized fimbrial-like protein YgiL 1
Uncharacterized fimbrial-like protein YraH 1

Protein length

Min length 167
Max length 206
Mean length (sd) 180.9 (10.5)
Median length 177.0

Protein length distribution