Orthogroup:group_534



Homologs in group_534

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_01185 FBDBKF_01185 Morganella morganii S1 qseF two-component system response regulator QseF/GlrR
EHELCC_00360 EHELCC_00360 Morganella morganii S2 qseF two-component system response regulator QseF/GlrR
NLDBIP_03100 NLDBIP_03100 Morganella morganii S4 qseF two-component system response regulator QseF/GlrR
LHKJJB_04615 LHKJJB_04615 Morganella morganii S3 qseF two-component system response regulator QseF/GlrR
HKOGLL_02430 HKOGLL_02430 Morganella morganii S5 qseF two-component system response regulator QseF/GlrR
F4V73_RS07255 F4V73_RS07255 Morganella psychrotolerans glrR two-component system response regulator GlrR
PMI_RS09240 PMI_RS09240 Proteus mirabilis HI4320 glrR two-component system response regulator GlrR

Distribution of group_534 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_534 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_534

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_534.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 qseF 5
2 glrR 2

Product

# Product Occurence
1 two-component system response regulator QseF/GlrR 5
2 two-component system response regulator GlrR 2

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG2204 7 T Signal transduction mechanisms (T) DNA-binding transcriptional response regulator, NtrC family, contains REC, AAA-type ATPase, and a Fis-type DNA-binding domains

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K07715 7 two-component system, NtrC family, response regulator GlrR Two-component system
Quorum sensing
-

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00072 7 Response regulator receiver domain
PF00158 7 Sigma-54 interaction domain

Annotations of the 547 SwissProt hits

Annotation Number of occurrences
3',5'-cyclic-nucleotide phosphodiesterase regA 1
Acetoin catabolism regulatory protein 1
Acetoin dehydrogenase operon transcriptional activator AcoR 1
Acid tolerance regulatory protein ActR 2
Aerobic respiration control protein ArcA homolog 1
Alginate biosynthesis transcriptional regulatory protein AlgB 3
Alkaline phosphatase synthesis transcriptional regulatory protein PhoP 1
Alkaline phosphatase synthesis transcriptional regulatory protein SphR 1
Anaerobic nitric oxide reductase transcription regulator NorR 52
C4-dicarboxylate transport transcriptional regulatory protein DctD 3
C4-dicarboxylate transport transcriptional regulatory protein DctR 1
CAI-1 autoinducer sensor kinase/phosphatase CqsS 2
Cell cycle response regulator CtrA 9
Cell cycle transcriptional regulator CtrA 2
Chemotaxis protein CheY 16
Chemotaxis protein CheY homolog 3
Chemotaxis protein CheY-3 2
Chemotaxis protein CheY1 2
Cyclic di-GMP phosphodiesterase TM_0186 1
Cyclic di-GMP phosphodiesterase response regulator RpfG 1
DNA-binding dual master transcriptional regulator RpaA 2
DNA-binding dual transcriptional regulator OmpR 8
DNA-binding response regulator MtrA 6
DNA-binding transcriptional activator HyfR 1
DNA-binding transcriptional regulator NtrC 10
Formate hydrogenlyase transcriptional activator 2
Formate hydrogenlyase transcriptional activator FhlA 1
Glycerol metabolism operon regulatory protein 1
HTH-type transcriptional regulatory protein TyrR 6
Heme response regulator HssR 18
Histidine kinase 1 1
Histidine kinase P4 1
Hybrid signal transduction histidine kinase B 1
Hybrid signal transduction histidine kinase I 1
Hybrid signal transduction histidine kinase J 1
Hybrid signal transduction protein dokA 1
Hydrogenase transcriptional regulatory protein HoxA 2
Hydrogenase transcriptional regulatory protein HupR1 1
KDP operon transcriptional regulatory protein KdpE 1
Limonene hydroxylase 1
Luminescence regulatory protein LuxO 2
Nif-specific regulatory protein 16
Nisin biosynthesis regulatory protein NisR 1
Nitric oxide reductase transcription regulator NorR1 1
Nitric oxide reductase transcription regulator NorR2 1
Nitrogen assimilation regulatory protein NtrX 1
Nitrogen fixation protein AnfA 1
Nitrogen fixation protein VnfA 1
Nodulation protein W 1
PTS-dependent dihydroxyacetone kinase operon regulatory protein 1
Pathogenicity locus probable regulatory protein HrpR 1
Pathogenicity locus probable regulatory protein HrpS 2
Pathogenicity locus probable regulatory protein WtsA 1
Phenol regulator MopR 1
Phosphate regulon transcriptional regulatory protein PhoB 5
Phosphoglycerate transport system transcriptional regulatory protein PgtA 1
Photosynthetic apparatus regulatory protein RegA 3
Positive alginate biosynthesis regulatory protein 1
Probable C4-dicarboxylate response regulator DctR 2
Probable chemotaxis protein CheY 1
Probable cyclic di-GMP phosphodiesterase VC_1348 1
Probable histidine kinase 4 1
Probable histidine kinase 6 1
Probable transcriptional regulator ycf27 7
Probable transcriptional regulator ycf29 3
Probable transcriptional regulatory protein SYNPCC7002_A0851 1
Probable transcriptional regulatory protein SilR 1
Probable transcriptional regulatory protein TcrX 1
Propionate catabolism operon regulatory protein 2
Protein PetR 1
Protein PilH 1
Protein RcaC 1
Protein-glutamate methylesterase/protein-glutamine glutaminase 5
Protein-glutamate methylesterase/protein-glutamine glutaminase 1 2
Protein-glutamate methylesterase/protein-glutamine glutaminase 3 1
Psp operon transcriptional activator 1
Putative response regulator NtrX-like 5
Putative sigma L-dependent transcriptional regulator YplP 1
Putative sigma L-dependent transcriptional regulator YqiR 1
Putative transcriptional regulator 1
Putative transcriptional regulatory protein y4pA 1
Putative two-component response regulator ARR20 1
Putative two-component response regulator ARR21 1
Putative uric acid sigma-54-dependent transcriptional regulator UacR 1
Regulator of RpoS 3
Regulatory protein AtoC 1
Regulatory protein LuxO 5
Regulatory protein VanR 1
Regulatory protein VirG 1
Response regulator ArlR 13
Response regulator GtcR 1
Response regulator MprA 14
Response regulator PleD 2
Response regulator RR06 2
Response regulator Rre1 1
Response regulator SaeR 12
Response regulator protein CarR 1
Response regulator protein FleR 1
Response regulator protein PilR 1
Response regulator protein PmrA 1
Response regulator protein TmoT 1
Response regulator protein TodT 3
Response regulator receiver protein Anae109_2439 1
Response regulator receiver protein CpdR 1
Sensor histidine kinase GacS 1
Sensor histidine kinase RcsC 4
Sensor histidine kinase SsrA 1
Sensor histidine kinase TodS 2
Sensor kinase CckA 1
Sensor protein EvgS 1
Sensor protein GacS 1
Sensory transduction protein BceR 2
Sensory transduction protein LytR 1
Sensory transduction protein RegX3 4
Sensory/regulatory protein RpfC 2
Sigma54-dependent transcriptional activator SfnR 1
Sigma54-dependent transcriptional regulator SfnR 1
Signal transduction histidine-protein kinase BarA 4
Signal-transduction and transcriptional-control protein 1
Sporulation initiation phosphotransferase F 2
Stage 0 sporulation protein A 4
Stage 0 sporulation protein A (Fragment) 2
Stage 0 sporulation protein A homolog 3
Swarming motility regulation protein RssB 1
Tetrathionate response regulatory protein TtrR 1
Transcription factor SKN7 2
Transcription factor prr1 1
Transcriptional activator RocR 1
Transcriptional activator protein CopR 1
Transcriptional activator protein CzcR 1
Transcriptional activator protein IrlR 2
Transcriptional activator protein PfeR 1
Transcriptional regulator FleQ 1
Transcriptional regulator VasH 1
Transcriptional regulatory protein AfsQ1 1
Transcriptional regulatory protein AruR 1
Transcriptional regulatory protein BasR 2
Transcriptional regulatory protein ChvI 3
Transcriptional regulatory protein CpxR 4
Transcriptional regulatory protein CpxR homolog 1
Transcriptional regulatory protein CrdR 1
Transcriptional regulatory protein CreB 1
Transcriptional regulatory protein CseB 2
Transcriptional regulatory protein CssR 1
Transcriptional regulatory protein CusR 3
Transcriptional regulatory protein DagR 1
Transcriptional regulatory protein DltR 2
Transcriptional regulatory protein FixJ 3
Transcriptional regulatory protein FlbD 1
Transcriptional regulatory protein FlgR 1
Transcriptional regulatory protein GlrR 1
Transcriptional regulatory protein GltR 1
Transcriptional regulatory protein HprR 1
Transcriptional regulatory protein HptR 9
Transcriptional regulatory protein KdpE 3
Transcriptional regulatory protein LevR 1
Transcriptional regulatory protein MalR 1
Transcriptional regulatory protein PcoR 1
Transcriptional regulatory protein PdtaR 2
Transcriptional regulatory protein PhoP 3
Transcriptional regulatory protein PmrA 1
Transcriptional regulatory protein PrrA 4
Transcriptional regulatory protein QseB 5
Transcriptional regulatory protein QseF 1
Transcriptional regulatory protein ResD 1
Transcriptional regulatory protein RprY 1
Transcriptional regulatory protein RtcR 1
Transcriptional regulatory protein SrrA 8
Transcriptional regulatory protein TcrA 2
Transcriptional regulatory protein TctD 2
Transcriptional regulatory protein TdiR 1
Transcriptional regulatory protein TrcR 1
Transcriptional regulatory protein WalR 23
Transcriptional regulatory protein XylR 1
Transcriptional regulatory protein YvrH 1
Transcriptional regulatory protein YxdJ 1
Transcriptional regulatory protein ZraR 5
Two-component response regulator ARR1 1
Two-component response regulator ARR10 1
Two-component response regulator ARR11 1
Two-component response regulator ARR12 1
Two-component response regulator ARR14 1
Two-component response regulator ARR18 1
Two-component response regulator ARR2 1
Two-component response regulator ARR7 1
Two-component response regulator EHD1 1
Two-component response regulator ORR11 2
Two-component response regulator ORR13 1
Two-component response regulator ORR21 2
Two-component response regulator ORR22 2
Two-component response regulator ORR23 2
Two-component response regulator ORR24 2
Two-component response regulator ORR25 1
Two-component response regulator ORR26 1
Two-component response regulator ORR3 2
Two-component response regulator ORR30 1
Two-component response regulator ORR5 2
Two-component response regulator ORR6 2
Two-component response regulator ORR7 1
Two-component response regulator ORR8 2
Two-component response regulator PhoP 1
Two-component response regulator-like APRR3 1
Two-component response regulator-like APRR7 1
Two-component response regulator-like PRR37 2
Two-component response regulator-like PRR73 2
Two-component response regulator-like PRR95 1
Two-component system protein A 1
Uncharacterized 14.6 kDa protein in sodA1 3'region 1
Uncharacterized protein LA_2151 1
Uncharacterized protein LIC_11769 1
Uncharacterized protein in HyuA 5'region (Fragment) 1
Uncharacterized protein in glnB 5'region (Fragment) 1
Uncharacterized response regulatory protein VC_A0850 1
Uncharacterized transcriptional regulatory protein YbdJ 1
Uncharacterized transcriptional regulatory protein YcbL 1
Uncharacterized transcriptional regulatory protein YclJ 1
Uncharacterized transcriptional regulatory protein YesN 1
Uncharacterized transcriptional regulatory protein YhcZ 1
Uncharacterized transcriptional regulatory protein YkoG 1
Uncharacterized transcriptional regulatory protein YrkP 1
Uncharacterized transcriptional regulatory protein YvcP 1
Virulence transcriptional regulatory protein PhoP 8

Protein length

Min length 445
Max length 446
Mean length (sd) 445.9 (0.4)
Median length 446.0

Protein length distribution