Orthogroup:group_3097


Homologs in group_3097

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_19300 FBDBKF_19300 Morganella morganii S1 ampR LysR family transcriptional regulator AmpR
EHELCC_07585 EHELCC_07585 Morganella morganii S2 ampR LysR family transcriptional regulator AmpR
NLDBIP_07910 NLDBIP_07910 Morganella morganii S4 ampR LysR family transcriptional regulator AmpR
LHKJJB_07445 LHKJJB_07445 Morganella morganii S3 ampR LysR family transcriptional regulator AmpR
HKOGLL_03485 HKOGLL_03485 Morganella morganii S5 ampR LysR family transcriptional regulator AmpR
F4V73_RS12060 F4V73_RS12060 Morganella psychrotolerans ampR LysR family transcriptional regulator AmpR

Distribution of group_3097 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_3097 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_3097

Orthogroup content: 6 members

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This page summarizes the annotation of all members of the orthologous group group_3097.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 ampR 6

Product

# Product Occurence
1 LysR family transcriptional regulator AmpR 6

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0583 6 K Transcription (K) DNA-binding transcriptional regulator, LysR family

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K17850 6 LysR family transcriptional regulator, regulator of gene expression of beta-lactamase beta-Lactam resistance -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00126 6 Bacterial regulatory helix-turn-helix protein, lysR family
PF03466 6 LysR substrate binding domain

Annotations of the 219 SwissProt hits

Annotation Number of occurrences
AhcY transcriptional activator HvrB 1
Carbapenem-hydrolyzing beta-lactamase transcriptional activator 2
Glycine cleavage system transcriptional activator 3
Glycine cleavage system transcriptional activator homolog 1
HTH-type transcriptional activator AaeR 3
HTH-type transcriptional activator AllS 11
HTH-type transcriptional activator AmpR 7
HTH-type transcriptional activator CmpR 3
HTH-type transcriptional activator IlvY 1
HTH-type transcriptional activator TtdR 5
HTH-type transcriptional regulator AbaB 1
HTH-type transcriptional regulator AbgR 1
HTH-type transcriptional regulator AlsR 1
HTH-type transcriptional regulator ArgP 20
HTH-type transcriptional regulator BbuR 1
HTH-type transcriptional regulator BenM 1
HTH-type transcriptional regulator BlaA 1
HTH-type transcriptional regulator BsdA 1
HTH-type transcriptional regulator BudR 1
HTH-type transcriptional regulator BudR (Fragment) 1
HTH-type transcriptional regulator CbbR 3
HTH-type transcriptional regulator CfxR 1
HTH-type transcriptional regulator CitR 1
HTH-type transcriptional regulator CrgA 2
HTH-type transcriptional regulator CynR 2
HTH-type transcriptional regulator CzcR 7
HTH-type transcriptional regulator DgdR 1
HTH-type transcriptional regulator DmlR 1
HTH-type transcriptional regulator DsdC 1
HTH-type transcriptional regulator GbpR 2
HTH-type transcriptional regulator GltR 1
HTH-type transcriptional regulator HdfR 48
HTH-type transcriptional regulator IlvR 1
HTH-type transcriptional regulator MetR 7
HTH-type transcriptional regulator NmoR 1
HTH-type transcriptional regulator PcaQ 2
HTH-type transcriptional regulator PerR 1
HTH-type transcriptional regulator PgrR 1
HTH-type transcriptional regulator PtxR 1
HTH-type transcriptional regulator ShiR 1
HTH-type transcriptional regulator SoxR 1
HTH-type transcriptional regulator TrpI 2
HTH-type transcriptional regulator TtuA 2
HTH-type transcriptional regulator XapR 1
HTH-type transcriptional regulator YhaJ 1
HTH-type transcriptional regulator YofA 2
HTH-type transcriptional repressor PA14_22550 1
Hca operon transcriptional activator HcaR 1
Iron-regulated virulence regulatory protein IrgB 2
Mau operon transcriptional activator 1
Probable HTH-type transcriptional regulator LtrA 1
Probable HTH-type transcriptional regulator YhaJ 1
Probable RuBisCO transcriptional regulator 15
Probable cat1 operon transcriptional activator 1
Probable hydrogen peroxide-inducible genes activator 2
Probable hydrogen peroxide-inducible genes activator (Fragment) 1
Probable nitrogen assimilation transcriptional activator 1
Putative transcriptional regulator 1
RuBisCO operon transcriptional regulator 2
SDS degradation transcriptional activation protein 1
Transcriptional dual regulator GltC 1
Uncharacterized HTH-type transcriptional regulator HI_1364 1
Uncharacterized HTH-type transcriptional regulator MJ0300 1
Uncharacterized HTH-type transcriptional regulator YafC 1
Uncharacterized HTH-type transcriptional regulator YahB 1
Uncharacterized HTH-type transcriptional regulator YbdO 1
Uncharacterized HTH-type transcriptional regulator YbhD 1
Uncharacterized HTH-type transcriptional regulator YcaN 1
Uncharacterized HTH-type transcriptional regulator YcgK 1
Uncharacterized HTH-type transcriptional regulator YdcI 1
Uncharacterized HTH-type transcriptional regulator YeiE 3
Uncharacterized HTH-type transcriptional regulator YfeR 2
Uncharacterized HTH-type transcriptional regulator YfiE 1
Uncharacterized HTH-type transcriptional regulator YhjC 1
Uncharacterized HTH-type transcriptional regulator YiaU 1
Uncharacterized HTH-type transcriptional regulator YkuM 1
Uncharacterized HTH-type transcriptional regulator YnfL 1
Uncharacterized HTH-type transcriptional regulator YraN 1
Uncharacterized HTH-type transcriptional regulator YusT 1
Uncharacterized HTH-type transcriptional regulator YvbU 1
Uncharacterized HTH-type transcriptional regulator YwbI 1
Uncharacterized HTH-type transcriptional regulator YwqM 1
Uncharacterized HTH-type transcriptional regulator YxjO 1
Uncharacterized HTH-type transcriptional regulator in ibpB-leuC intergenic region 1
Uncharacterized HTH-type transcriptional regulator y4mQ 1

Protein length

Unique protein length 291

Protein length distribution