Orthogroup:group_286


Homologs in group_286

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8 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_06720 FBDBKF_06720 Morganella morganii S1 dps DNA starvation/stationary phase protection protein Dps
EHELCC_04250 EHELCC_04250 Morganella morganii S2 dps DNA starvation/stationary phase protection protein Dps
NLDBIP_04250 NLDBIP_04250 Morganella morganii S4 dps DNA starvation/stationary phase protection protein Dps
LHKJJB_10080 LHKJJB_10080 Morganella morganii S3 dps DNA starvation/stationary phase protection protein Dps
HKOGLL_08895 HKOGLL_08895 Morganella morganii S5 dps DNA starvation/stationary phase protection protein Dps
F4V73_RS00875 F4V73_RS00875 Morganella psychrotolerans dps DNA starvation/stationary phase protection protein Dps
PMI_RS03110 PMI_RS03110 Proteus mirabilis HI4320 dps DNA starvation/stationary phase protection protein Dps
PMI_RS08845 PMI_RS08845 Proteus mirabilis HI4320 - DNA starvation/stationary phase protection protein

Distribution of group_286 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_286 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_286

Orthogroup content: 8 members

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This page summarizes the annotation of all members of the orthologous group group_286.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 dps 7
2 - 1

Product

# Product Occurence
1 DNA starvation/stationary phase protection protein Dps 7
2 DNA starvation/stationary phase protection protein 1

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0783 8 PV Inorganic ion transport and metabolism (P)
Defense mechanisms (V)		 DNA-binding ferritin-like protein (oxidative damage protectant)

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K04047 8 starvation-inducible DNA-binding protein - -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00210 8 Ferritin-like domain

Annotations of the 98 SwissProt hits

Annotation Number of occurrences
Antigen TpF1 1
Antigen TyF1 1
DNA protection during starvation protein 83
DNA protection during starvation protein 1 2
DNA protection during starvation protein 2 2
Fine tangled pili major subunit 1
General stress protein 20U 1
Metalloregulation DNA-binding stress protein 1
Nutrient stress-induced DNA-binding protein 1
Protein MrgA 1
Uncharacterized low temperature-induced protein all0458 1
Uncharacterized low temperature-induced protein all0458 homolog 1
Uncharacterized protein HI_1349 1
Uncharacterized protein in bpoA2 5'region (Fragment) 1

Protein length

Min length 167
Max length 184
Mean length (sd) 169.2 (6.0)
Median length 167.0

Protein length distribution