Orthogroup:group_263


Homologs in group_263

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8 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_04745 FBDBKF_04745 Morganella morganii S1 glpR DeoR family transcriptional regulator
EHELCC_06035 EHELCC_06035 Morganella morganii S2 glpR DeoR family transcriptional regulator
NLDBIP_06355 NLDBIP_06355 Morganella morganii S4 glpR DeoR family transcriptional regulator
LHKJJB_03235 LHKJJB_03235 Morganella morganii S3 glpR DeoR family transcriptional regulator
HKOGLL_06710 HKOGLL_06710 Morganella morganii S5 glpR DeoR family transcriptional regulator
F4V73_RS09215 F4V73_RS09215 Morganella psychrotolerans - DeoR family transcriptional regulator
PMI_RS10550 PMI_RS10550 Proteus mirabilis HI4320 agaR transcriptional repressor AgaR
PMI_RS17455 PMI_RS17455 Proteus mirabilis HI4320 - DeoR family transcriptional regulator

Distribution of group_263 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_263 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_263

Orthogroup content: 8 members

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This page summarizes the annotation of all members of the orthologous group group_263.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 glpR 5
2 - 2
3 agaR 1

Product

# Product Occurence
1 DeoR family transcriptional regulator 7
2 transcriptional repressor AgaR 1

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG1349 8 KG Transcription (K)
Carbohydrate transport and metabolism (G)		 DNA-binding transcriptional regulator of sugar metabolism, DeoR/GlpR family

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K02081 7 DeoR family transcriptional regulator, aga operon transcriptional repressor - -
K11534 1 DeoR family transcriptional regulator, deoxyribose operon repressor - -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00455 8 DeoR C terminal sensor domain
PF08220 8 DeoR-like helix-turn-helix domain

Annotations of the 81 SwissProt hits

Annotation Number of occurrences
Deoxyribose operon repressor 3
Glucitol operon repressor 1
Glycerol-3-phosphate regulon repressor 4
HTH-type transcriptional regulator GlpR 1
HTH-type transcriptional regulator GolR 1
HTH-type transcriptional regulator IolR 1
HTH-type transcriptional regulator UlaR 41
HTH-type transcriptional repressor CsqR 1
HTH-type transcriptional repressor GlcR 1
L-fucose operon activator 3
Lactose phosphotransferase system repressor 11
Putative aga operon transcriptional repressor 3
Putative galactitol utilization operon repressor 1
Putative sgc region transcriptional regulator 1
Transcriptional repressor AccR 1
Uncharacterized HTH-type transcriptional regulator FruR 1
Uncharacterized HTH-type transcriptional regulator HI_1009 1
Uncharacterized HTH-type transcriptional regulator SE_1102 1
Uncharacterized HTH-type transcriptional regulator YciT 1
Uncharacterized HTH-type transcriptional regulator YdjF 1
Uncharacterized HTH-type transcriptional regulator YgbI 1
Uncharacterized HTH-type transcriptional regulator YulB 1

Protein length

Min length 258
Max length 269
Mean length (sd) 266.4 (4.9)
Median length 269.0

Protein length distribution