COG0079
Help to interpret the results
Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG0079, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries
within the database. 20 occurences are identified.
The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction.
Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.
Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.
Description
Description |
Histidinol-phosphate/aromatic aminotransferase or cobyric acid decarboxylase |
Function(s) descr. |
Amino acid transport and metabolism (E) |
Occurence in the database
COG0079 is associated with 20 different proteins (see tab "Protein list" and "Profile") |
The 20 proteins are classified into 3 different orthogroup(s)
|
# |
Orthogroup |
Locus |
Start |
Stop |
S. |
Gene |
Product |
Organism |
0 |
group_288 |
FBDBKF_06920 |
48404 |
49480 |
-1 |
hisC |
histidinol-phosphate transaminase |
Morganella morganii S1 |
1 |
group_2724 |
FBDBKF_07450 |
1302 |
2372 |
1 |
cobD |
threonine-phosphate decarboxylase CobD |
Morganella morganii S1 |
2 |
group_1950 |
FBDBKF_14640 |
27292 |
28461 |
1 |
hisC |
Histidinol-phosphate/aromatic aminotransferase or cobyric acid decarboxylase |
Morganella morganii S1 |
3 |
group_288 |
EHELCC_04050 |
136706 |
137782 |
1 |
hisC |
histidinol-phosphate transaminase |
Morganella morganii S2 |
4 |
group_1950 |
EHELCC_15445 |
57368 |
58537 |
1 |
hisC |
Histidinol-phosphate/aromatic aminotransferase or cobyric acid decarboxylase |
Morganella morganii S2 |
5 |
group_2724 |
EHELCC_17120 |
28952 |
30022 |
1 |
cobD |
threonine-phosphate decarboxylase CobD |
Morganella morganii S2 |
6 |
group_288 |
NLDBIP_04050 |
136502 |
137578 |
1 |
hisC |
histidinol-phosphate transaminase |
Morganella morganii S4 |
7 |
group_1950 |
NLDBIP_15975 |
57368 |
58537 |
1 |
hisC |
Histidinol-phosphate/aromatic aminotransferase or cobyric acid decarboxylase |
Morganella morganii S4 |
8 |
group_2724 |
NLDBIP_18500 |
28951 |
30021 |
1 |
cobD |
threonine-phosphate decarboxylase CobD |
Morganella morganii S4 |
9 |
group_2724 |
LHKJJB_09125 |
162308 |
163378 |
-1 |
cobD |
threonine-phosphate decarboxylase CobD |
Morganella morganii S3 |
10 |
group_288 |
LHKJJB_09880 |
136616 |
137692 |
1 |
hisC |
histidinol-phosphate transaminase |
Morganella morganii S3 |
11 |
group_1950 |
LHKJJB_15865 |
58149 |
59318 |
-1 |
hisC |
Histidinol-phosphate/aromatic aminotransferase or cobyric acid decarboxylase |
Morganella morganii S3 |
12 |
group_2724 |
HKOGLL_08675 |
162308 |
163378 |
-1 |
cobD |
threonine-phosphate decarboxylase CobD |
Morganella morganii S5 |
13 |
group_288 |
HKOGLL_09095 |
53360 |
54436 |
-1 |
hisC |
histidinol-phosphate transaminase |
Morganella morganii S5 |
14 |
group_1950 |
HKOGLL_14985 |
57361 |
58530 |
-1 |
hisC |
Histidinol-phosphate/aromatic aminotransferase or cobyric acid decarboxylase |
Morganella morganii S5 |
15 |
group_288 |
F4V73_RS01105 |
233335 |
234411 |
-1 |
hisC |
histidinol-phosphate transaminase |
Morganella psychrotolerans |
16 |
group_1950 |
F4V73_RS07435 |
1555682 |
1556851 |
1 |
|
aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme |
Morganella psychrotolerans |
17 |
group_2724 |
F4V73_RS13670 |
369833 |
370939 |
-1 |
cobD |
threonine-phosphate decarboxylase CobD |
Morganella psychrotolerans |
18 |
group_288 |
PMI_RS03265 |
720858 |
721940 |
-1 |
hisC |
histidinol-phosphate transaminase |
Proteus mirabilis HI4320 |
19 |
group_1950 |
PMI_RS07080 |
1546004 |
1547161 |
1 |
|
aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme |
Proteus mirabilis HI4320 |