Orthogroup:group_2303


Homologs in group_2303

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_17695 FBDBKF_17695 Morganella morganii S1 hupA nucleoid-associated protein HU-alpha
EHELCC_18180 EHELCC_18180 Morganella morganii S2 hupA nucleoid-associated protein HU-alpha
NLDBIP_17970 NLDBIP_17970 Morganella morganii S4 hupA nucleoid-associated protein HU-alpha
LHKJJB_18165 LHKJJB_18165 Morganella morganii S3 hupA nucleoid-associated protein HU-alpha
HKOGLL_18035 HKOGLL_18035 Morganella morganii S5 hupA nucleoid-associated protein HU-alpha
F4V73_RS15075 F4V73_RS15075 Morganella psychrotolerans hupA nucleoid-associated protein HU-alpha
PMI_RS13685 PMI_RS13685 Proteus mirabilis HI4320 - HU family DNA-binding protein

Distribution of group_2303 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_2303 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_2303

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_2303.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 hupA 6
2 - 1

Product

# Product Occurence
1 nucleoid-associated protein HU-alpha 6
2 HU family DNA-binding protein 1

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0776 7 L Replication, recombination and repair (L) Bacterial nucleoid DNA-binding protein IHF-alpha

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K05787 7 DNA-binding protein HU-alpha - -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00216 7 Bacterial DNA-binding protein

Annotations of the 569 SwissProt hits

Annotation Number of occurrences
DNA-binding protein HB1 1
DNA-binding protein HRL18 2
DNA-binding protein HRL53 1
DNA-binding protein HRm 1
DNA-binding protein HU 41
DNA-binding protein HU 1 3
DNA-binding protein HU 2 3
DNA-binding protein HU homolog 1
DNA-binding protein HU-1 2
DNA-binding protein HU-alpha 14
DNA-binding protein HU-beta 12
DNA-binding protein HU-beta 2 1
Integration host factor subunit alpha 238
Integration host factor subunit alpha (Fragment) 1
Integration host factor subunit alpha 1 1
Integration host factor subunit alpha 2 1
Integration host factor subunit beta 245
SPbeta prophage-derived DNA-binding protein HU 2 1

Protein length

Unique protein length 90

Protein length distribution