K03547


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected Kegg Orthologs K03547, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the Kegg Orthologs within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the Kegg Ortholog(s) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported Kegg Orthologs has been clustered.
In red the Kegg Orthologs with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and Kegg Orthologs prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered Kegg Orthologs.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or Kegg Orthologs prediction.

Description

External link K03547
KO K03547
Description DNA repair protein SbcD/Mre11

KO part of 0 pathways

KO part of 0 modules

Occurence in the database

K03547 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_2268 PMI_RS00245 77490 78722 -1 sbcD exonuclease subunit SbcD Proteus mirabilis HI4320
1 group_2268 FBDBKF_17440 19598 20890 1 sbcD exonuclease subunit SbcD Morganella morganii S1
2 group_2268 EHELCC_17335 19598 20890 1 sbcD exonuclease subunit SbcD Morganella morganii S2
3 group_2268 NLDBIP_17860 21906 23198 -1 sbcD exonuclease subunit SbcD Morganella morganii S4
4 group_2268 LHKJJB_17780 21904 23196 -1 sbcD exonuclease subunit SbcD Morganella morganii S3
5 group_2268 HKOGLL_17790 21904 23196 -1 sbcD exonuclease subunit SbcD Morganella morganii S5
6 group_2268 F4V73_RS16615 143325 144551 1 sbcD exonuclease subunit SbcD Morganella psychrotolerans